Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.4□□□□□ -1.7
HDAC9Q9UKV0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDAC9Q9UKV0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDAC9Q9UKV0 U3.19-201ENST00000390893 196 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 RPS20P2-201ENST00000402520 389 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 RAC1P3-201ENST00000416129 580 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 MTCO3P12-201ENST00000416718 547 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 RPS3AP44-201ENST00000425466 790 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC011742.1-201ENST00000431448 434 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC244505.5-201ENST00000443639 207 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 RPL7P52-201ENST00000449200 742 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC010655.1-201ENST00000449336 292 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 RPS4XP13-201ENST00000483219 789 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 RPS26P15-201ENST00000488067 348 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC068305.1-201ENST00000497406 726 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 RNA5SP208-201ENST00000516156 78 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC090877.1-201ENST00000561418 344 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC009101.1-201ENST00000568135 242 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC010546.1-201ENST00000569391 485 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC090615.1-201ENST00000577519 154 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC009977.1-201ENST00000586015 570 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC006329.2-201ENST00000611491 394 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC108479.2-201ENST00000617314 601 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 AC091925.2-201ENST00000625059 256 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.4□□□□□ -1.71
HDAC9Q9UKV0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC092447.7-201ENST00000422212 1621 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC244517.1-201ENST00000606030 2086 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AF127577.6-201ENST00000623352 2191 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 Y_RNA.46-201ENST00000362695 102 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 RNU1-33P-201ENST00000364249 162 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 Y_RNA.548-201ENST00000384656 105 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 UBA52P6-201ENST00000399822 382 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 RPL7P25-201ENST00000404151 721 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 RNA5SP39-201ENST00000411245 120 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 RAD23BP2-201ENST00000416003 1207 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 RPL21P66-201ENST00000426566 466 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 SKP1P1-201ENST00000438081 489 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AL353691.1-201ENST00000451332 387 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 KLF3P2-201ENST00000465138 268 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AP003392.2-201ENST00000527269 208 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AP003122.4-201ENST00000530980 758 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC009063.1-201ENST00000563342 702 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC098614.4-201ENST00000607601 462 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC008498.1-201ENST00000613012 531 ntBASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
HDAC9Q9UKV0 BDP1P-201ENST00000582658 1990 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 SNORD51-201ENST00000384320 80 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 RNU6-1207P-201ENST00000384343 107 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 RNU6-1215P-201ENST00000384441 102 ntBASIC4.38□□□□□ -1.71
HDAC9Q9UKV0 AL356421.1-201ENST00000403255 413 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms