Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCNL1Q9UK58 ELF2P3-201ENST00000445099 1506 ntBASIC4.3□□□□□ -1.72
CCNL1Q9UK58 SAGE4P-201ENST00000442271 3381 ntBASIC4.3□□□□□ -1.72
CCNL1Q9UK58 ELL2P4-201ENST00000446870 1376 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 RNA5SP52-201ENST00000362448 134 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 RNU1-18P-201ENST00000363062 164 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 RNA5SP42-201ENST00000364278 115 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 Y_RNA.548-201ENST00000384656 105 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 RNU6-780P-201ENST00000391030 104 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 SNORD115-47-201ENST00000391226 86 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 RPL31P1-201ENST00000398116 372 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 MTCO1P17-201ENST00000411522 491 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC078974.1-201ENST00000411597 223 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC069218.2-201ENST00000411665 344 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 BX295541.1-201ENST00000417774 250 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 MTCYBP45-201ENST00000435243 565 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 RPL23AP74-201ENST00000437246 471 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 Z99127.3-201ENST00000448158 395 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 RN7SL863P-201ENST00000462370 296 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 MTND1P3-201ENST00000484956 952 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC093677.1-201ENST00000514414 678 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 RNU6-314P-201ENST00000516574 104 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC137800.2-201ENST00000574375 120 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AL353997.4-201ENST00000586196 166 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 BNIP3P30-201ENST00000601184 574 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 IGHV3-29-201ENST00000604817 344 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AL365503.1-201ENST00000605247 905 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AL391813.2-201ENST00000609113 322 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.29□□□□□ -1.72
CCNL1Q9UK58 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCNL1Q9UK58 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 RNA5SP146-201ENST00000410743 123 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 GLRXP1-201ENST00000423261 334 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AL358934.1-201ENST00000432346 324 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AL450263.2-201ENST00000439400 589 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 RPL17P49-201ENST00000443728 411 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 FAM103A2P-201ENST00000444122 354 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 RPS3AP17-201ENST00000472594 777 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 KC877373.1-201ENST00000479066 408 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC019235.1-201ENST00000503847 207 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC006390.1-201ENST00000508068 283 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC110792.2-201ENST00000510278 224 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC022861.1-201ENST00000522981 663 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AK6P1-201ENST00000540219 478 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 HIGD1AP1-201ENST00000550979 275 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC080013.4-201ENST00000607624 649 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC103710.1-201ENST00000610003 901 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC090970.3-201ENST00000612566 866 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AL158209.2-201ENST00000619266 216 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC004009.2-201ENST00000623016 728 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 CYP3A51P-201ENST00000633513 256 ntBASIC4.28□□□□□ -1.72
CCNL1Q9UK58 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNL1Q9UK58 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms