Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ELOCP9-201ENST00000418624 239 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 RPL27AP8-201ENST00000424277 446 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 RPL21P40-201ENST00000428586 483 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC024082.2-201ENST00000434771 238 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 RPS25P9-201ENST00000435591 252 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC112653.1-201ENST00000443851 386 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC234775.1-201ENST00000454247 670 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 USP9YP10-201ENST00000454868 628 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 RPL7P18-201ENST00000478965 734 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC017037.2-201ENST00000513850 890 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC093677.1-201ENST00000514414 678 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 RNA5SP356-201ENST00000515972 94 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 COX6CP8-201ENST00000522620 226 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 ERHP1-201ENST00000523006 310 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC022690.1-201ENST00000526681 550 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 CYCSP39-201ENST00000565821 309 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC034268.2-201ENST00000571784 482 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC011451.2-201ENST00000604303 598 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC006213.4-201ENST00000616184 634 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 AP000776.1-201ENST00000530032 1663 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLCF1Q9UBD9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLCF1Q9UBD9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CLCF1Q9UBD9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLCF1Q9UBD9 DEFB108F-201ENST00000344638 222 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AL161781.1-201ENST00000354277 403 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLCF1Q9UBD9 Y_RNA.234-201ENST00000364409 97 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 RPL21P3-201ENST00000395517 478 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 API5P2-201ENST00000397055 1498 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AL031121.1-201ENST00000406553 254 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 MIR1289-1-201ENST00000408836 144 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AL139281.1-201ENST00000422120 335 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 ZYG11AP1-201ENST00000430329 837 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 RPS20P5-201ENST00000434808 360 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 SNRPEP7-201ENST00000438350 220 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 MTND5P14-201ENST00000441481 1267 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC002381.1-201ENST00000447049 280 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 USP9YP25-201ENST00000457708 443 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC146507.2-201ENST00000460608 476 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 RPL21P8-201ENST00000465083 535 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC104563.1-201ENST00000476147 376 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC004924.1-201ENST00000480160 781 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLCF1Q9UBD9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 MTCO1P9-201ENST00000505577 1534 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC021146.8-201ENST00000507455 733 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 CUL1P1-201ENST00000509510 2425 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 FAM60DP-201ENST00000524174 632 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 DEFB108D-201ENST00000527787 222 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC034105.3-201ENST00000565294 442 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC055876.1-202ENST00000567053 138 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC008962.1-201ENST00000605729 304 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC080013.3-201ENST00000606839 578 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC002076.2-201ENST00000617362 122 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC013470.4-201ENST00000619978 986 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC002550.2-201ENST00000621246 394 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 MIR6852-201ENST00000621699 66 ntBASIC2.55□□□□□ -2
CLCF1Q9UBD9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.55□□□□□ -2
CLCF1Q9UBD9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLCF1Q9UBD9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms