Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MIR1264-201ENST00000616374 69 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 STMN1P1-201ENST00000617809 440 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC090617.9-201ENST00000623751 147 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC093591.3-201ENST00000634516 308 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 SNORA14A-201ENST00000364773 135 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 CD24P4-201ENST00000382840 243 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 DSTNP4-201ENST00000399472 474 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 TRIM60P13-201ENST00000432350 1283 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AL590664.1-201ENST00000448065 339 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 snoU13.4-201ENST00000458916 104 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 RPL30P14-201ENST00000482744 348 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 XIAPP1-201ENST00000603162 600 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AC009314.1-201ENST00000603871 304 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AP004247.3-201ENST00000608682 624 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AC008083.4-201ENST00000615076 444 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AC068831.7-201ENST00000616954 363 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 AC090897.3-201ENST00000636973 1157 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CCDC88CQ9P219 MTND4P8-201ENST00000514997 1362 ntBASIC1.89□□□□□ -2.11
CCDC88CQ9P219 SNORA1.3-201ENST00000384676 136 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 SPA17P1-201ENST00000416656 452 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 TOMM22P1-201ENST00000418578 312 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AL031183.1-201ENST00000457667 207 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 MRPL42P6-201ENST00000486397 371 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 EEF1A1P37-201ENST00000522748 715 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC087272.1-201ENST00000523624 533 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 MTCYBP28-201ENST00000566728 1132 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC245884.12-201ENST00000615364 59 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 MTND5P29-201ENST00000458676 1807 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 SNORD51.1-201ENST00000365405 77 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 NDUFB4P6-201ENST00000436819 366 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AL109741.2-201ENST00000455561 343 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 HMGN2P23-201ENST00000456759 269 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC025181.1-201ENST00000477507 416 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 HMGB1P22-201ENST00000505315 124 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 RNU6-488P-201ENST00000515918 99 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 RNU6-751P-201ENST00000516382 101 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AP003385.6-201ENST00000531603 374 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC233266.2-201ENST00000567067 528 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC124283.4-201ENST00000581815 456 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 BX322635.1-201ENST00000605804 496 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC012467.1-201ENST00000607740 256 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AC018926.3-201ENST00000618841 406 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 SGO1P2-201ENST00000429458 1589 ntBASIC1.88□□□□□ -2.11
CCDC88CQ9P219 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
CCDC88CQ9P219 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC88CQ9P219 RNU6-821P-201ENST00000390995 107 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 RPL7P30-201ENST00000420888 709 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 RPL23AP58-201ENST00000440453 469 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AC090255.1-201ENST00000495779 349 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC88CQ9P219 GNAI2P1-201ENST00000541815 315 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AC025918.2-201ENST00000558683 763 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 RPS3AP23-202ENST00000574601 686 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AC055876.5-201ENST00000605667 259 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AC104307.1-201ENST00000616142 196 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 AP003400.6-201ENST00000624698 740 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 MIR203B-201ENST00000636080 86 ntBASIC1.87□□□□□ -2.11
CCDC88CQ9P219 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms