Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC061975.8-201ENST00000587058 721 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC013553.2-201ENST00000604244 589 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 RNU6-859P-201ENST00000362728 107 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC027644.1-201ENST00000419595 298 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC007742.1-201ENST00000425789 329 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AL590233.1-201ENST00000430017 456 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 ELOCP26-201ENST00000436067 329 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 CR769767.1-201ENST00000436337 346 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 MRPL42P4-201ENST00000453267 443 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 snoZ278.1-201ENST00000517059 112 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AP003066.2-201ENST00000529375 555 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 MYL12BP1-201ENST00000569826 507 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 MIR3944-201ENST00000581277 108 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AL035411.2-201ENST00000604022 421 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AL161756.2-201ENST00000604597 246 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC007619.2-201ENST00000605743 379 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AP005229.2-201ENST00000609980 697 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC245517.5-201ENST00000611529 162 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AC011890.2-201ENST00000613393 294 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 AL450472.3-201ENST00000615578 367 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
VAPAQ9P0L0 Z82209.1-201ENST00000422141 2135 ntBASIC2.32□□□□□ -2.04
VAPAQ9P0L0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC069528.2-201ENST00000624849 1991 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC073346.2-201ENST00000624724 2058 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 RNU1-51P-201ENST00000365345 176 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 SNORA41-201ENST00000384675 132 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 MCTS2P-201ENST00000394552 546 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 SPA17P1-201ENST00000416656 452 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC099548.1-201ENST00000421443 426 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 FAM204CP-201ENST00000424489 642 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AL590383.1-201ENST00000428602 75 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AL356867.1-201ENST00000429623 299 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 RPS15AP7-201ENST00000439294 405 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 MTCYBP3-201ENST00000445588 1137 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 MOB1AP2-201ENST00000446060 614 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 DDX3P2-201ENST00000446138 111 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AP000936.2-201ENST00000447151 681 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 RPS15AP27-201ENST00000449183 343 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 SNORD109B-201ENST00000458961 67 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 SNORD109A-201ENST00000459128 67 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC087588.1-201ENST00000462203 316 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 HSPE1P6-201ENST00000479457 291 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 CAB39P1-201ENST00000502277 460 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 MRPS36P2-201ENST00000512569 299 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC112673.1-201ENST00000513168 575 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 RNU5A-7P-201ENST00000515979 116 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 RNA5SP471-201ENST00000516971 106 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AP001189.2-201ENST00000527320 189 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC122134.1-202ENST00000569111 1201 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 ATP1B3P1-201ENST00000605365 821 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AL137790.1-201ENST00000634283 177 ntBASIC2.31□□□□□ -2.04
VAPAQ9P0L0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VAPAQ9P0L0 AL512283.1-201ENST00000606756 1384 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms