Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AL157700.1-201ENST00000561973 1432 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC007685.1-201ENST00000329806 452 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 RNU6-1029P-201ENST00000384109 107 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 RN7SKP216-201ENST00000411050 312 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 RPL7P28-201ENST00000437739 740 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC007967.1-201ENST00000455422 1159 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC008481.1-201ENST00000463278 396 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 RPL7P19-201ENST00000469948 618 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 RPL21P99-201ENST00000480369 423 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 RNU7-30P-201ENST00000516835 62 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 TOMM20P2-201ENST00000540082 421 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 MIR4480-201ENST00000582492 71 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AL138721.1-201ENST00000616756 179 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 MIR7154-201ENST00000620673 73 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC025034.2-201ENST00000623264 286 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC006971.1-201ENST00000407916 4486 ntBASIC3.98□□□□□ -1.77
VSX1Q9NZR4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VSX1Q9NZR4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 LINC02471-203ENST00000641941 4752 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC067945.1-201ENST00000342609 618 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RNU6-82P-201ENST00000363970 107 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RNU6-38P-201ENST00000384085 107 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 MIR659-201ENST00000384963 97 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 TXNP7-201ENST00000406296 293 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RNU4-46P-201ENST00000410818 138 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RNU4-78P-201ENST00000410940 126 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RPS12P10-201ENST00000427031 377 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AL360081.1-201ENST00000428299 555 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 TAAR7P-201ENST00000436141 242 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RPL21P133-201ENST00000443666 476 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 SNRPGP5-201ENST00000456003 220 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RPS29P15-201ENST00000458329 171 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RNU6-333P-201ENST00000459117 107 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RPS26P28-201ENST00000470806 348 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 RPL23AP55-201ENST00000498163 452 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 HMGN1P13-201ENST00000505795 138 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC004062.1-201ENST00000509926 645 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC105029.1-201ENST00000520250 669 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 MTND4P7-201ENST00000523876 130 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AP000827.1-201ENST00000527814 258 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 MIR4424-201ENST00000585257 86 ntBASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.97□□□□□ -1.77
VSX1Q9NZR4 AL022099.1-201ENST00000604551 712 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms