Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL159169.1-201ENST00000421119 127 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 YME1L1P1-201ENST00000429435 297 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 RPL21P112-201ENST00000434403 463 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AL596276.1-201ENST00000434465 418 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 FGF7P6-202ENST00000451282 293 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 NANOGP10-201ENST00000453325 895 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 RNU7-170P-201ENST00000459303 61 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AP000873.1-201ENST00000463987 400 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC021382.1-201ENST00000483523 359 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC112204.1-201ENST00000502591 103 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC021146.1-201ENST00000511202 716 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 RNU6-1003P-201ENST00000517099 105 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 MTCO2P4-201ENST00000517968 247 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AP003467.2-201ENST00000520175 319 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 DEFB108A-201ENST00000530110 222 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC034268.2-201ENST00000571784 482 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC137800.2-201ENST00000574375 120 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC091135.1-201ENST00000585943 307 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 VN1R79P-201ENST00000593540 513 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC011451.2-201ENST00000604303 598 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC092954.2-201ENST00000609103 430 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC136475.10-201ENST00000620253 385 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC244100.1-202ENST00000621554 382 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AC093908.1-201ENST00000623125 8092 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 AL365440.1-201ENST00000436135 2167 ntBASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.82□□□□□ -1.8
NCKIPSDQ9NZQ3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AL157700.1-201ENST00000561973 1432 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 SNORA63.1-201ENST00000362493 131 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 Y_RNA.46-201ENST00000362695 102 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RNU6-359P-201ENST00000365466 108 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 SNORD3H-201ENST00000384486 214 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RPL7P25-201ENST00000404151 721 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 HSPE1P8-201ENST00000406997 288 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 SNORA11.1-201ENST00000408133 129 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RNU6-195P-201ENST00000411352 109 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AL591419.1-201ENST00000427423 339 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 MTND3P21-201ENST00000433774 331 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 FAM103A2P-201ENST00000444122 354 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 TRBV12-2-201ENST00000489763 344 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC078918.1-201ENST00000498515 228 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC108078.1-201ENST00000508073 725 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RNU1-95P-201ENST00000516357 160 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RNU1-128P-201ENST00000516704 160 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RN7SKP209-201ENST00000516888 304 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RNU2-46P-201ENST00000517038 113 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 SNORA31.20-201ENST00000517111 133 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AL157394.1-201ENST00000562983 1224 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC087499.8-201ENST00000578406 226 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 TPMTP1-201ENST00000592307 737 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AL049634.3-201ENST00000604968 457 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC091304.9-201ENST00000612091 226 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AC004925.1-201ENST00000624256 2706 ntBASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKIPSDQ9NZQ3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCKIPSDQ9NZQ3 MTCO1P9-201ENST00000505577 1534 ntBASIC3.8□□□□□ -1.8
NCKIPSDQ9NZQ3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCKIPSDQ9NZQ3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.8□□□□□ -1.8
NCKIPSDQ9NZQ3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NCKIPSDQ9NZQ3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCKIPSDQ9NZQ3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NCKIPSDQ9NZQ3 SNORA70.4-201ENST00000365509 134 ntBASIC3.8□□□□□ -1.8
NCKIPSDQ9NZQ3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms