Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MFSD8-242ENST00000641690 4199 ntBASIC4.3□□□□□ -1.72
MKS1Q9NXB0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
MKS1Q9NXB0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MKS1Q9NXB0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.3□□□□□ -1.72
MKS1Q9NXB0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.3□□□□□ -1.72
MKS1Q9NXB0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 Y_RNA.255-201ENST00000364581 97 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 RNU6-946P-201ENST00000383878 107 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 RNY3P14-201ENST00000384309 102 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 SNORA24.1-201ENST00000384401 135 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 FGF7P8-201ENST00000402994 292 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 Y_RNA.604-201ENST00000410574 102 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 SNRPEP10-201ENST00000420249 274 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC018630.2-202ENST00000422992 927 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 RPS29P15-201ENST00000458329 171 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 RPL7AP6-201ENST00000477943 801 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AL163973.1-201ENST00000484753 577 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 FCF1P3-201ENST00000496394 590 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AL592156.1-201ENST00000508758 304 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 PCBP2P3-201ENST00000509726 843 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 RNA5SP401-201ENST00000515920 127 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AP006587.4-201ENST00000526053 529 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC118273.2-201ENST00000532092 465 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 OR5AL2P-201ENST00000532185 920 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AL355836.1-201ENST00000555951 870 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 BDH2P1-201ENST00000602288 736 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AL031320.1-201ENST00000604177 357 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC133644.2-201ENST00000608142 540 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AL020991.1-201ENST00000612314 373 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC103858.2-201ENST00000621471 543 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC007998.5-201ENST00000622938 237 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC025034.2-201ENST00000623264 286 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC099654.14-201ENST00000638599 341 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MKS1Q9NXB0 RAD17P1-201ENST00000418130 2042 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 AC016588.2-201ENST00000632484 3021 ntBASIC4.29□□□□□ -1.72
MKS1Q9NXB0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 RNU6-600P-201ENST00000362524 99 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 RNU2-37P-201ENST00000410695 177 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AL139095.3-201ENST00000419672 1203 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AL132765.1-201ENST00000434165 553 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 CALM1P1-201ENST00000442082 433 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 HMGB3P22-202ENST00000451823 572 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AC083982.1-201ENST00000485679 344 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 RN7SKP258-201ENST00000517151 304 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 OR5B19P-201ENST00000531766 928 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AC044860.2-201ENST00000561005 179 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 MIR548S-201ENST00000581352 82 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AP001029.3-201ENST00000588063 596 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 NRBF2P5-201ENST00000603087 788 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AC211433.2-201ENST00000608433 387 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AP001486.3-201ENST00000615334 372 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AC068870.2-201ENST00000620635 389 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 AC024940.5-201ENST00000622889 474 ntBASIC4.28□□□□□ -1.72
MKS1Q9NXB0 MIR3662-201ENST00000637030 95 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms