Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MTND6P33-201ENST00000571794 183 ntBASIC5.2□□□□□ -1.58
CBX8Q9HC52 MIR4503-201ENST00000582187 83 ntBASIC5.2□□□□□ -1.58
CBX8Q9HC52 AC069061.3-201ENST00000582254 823 ntBASIC5.2□□□□□ -1.58
CBX8Q9HC52 AC091178.1-203ENST00000584586 279 ntBASIC5.2□□□□□ -1.58
CBX8Q9HC52 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.2□□□□□ -1.58
CBX8Q9HC52 AC011487.3-201ENST00000593607 453 ntBASIC5.2□□□□□ -1.58
CBX8Q9HC52 FAM157A-202ENST00000615155 405 ntBASIC5.2□□□□□ -1.58
CBX8Q9HC52 SNHG22-203ENST00000617833 660 ntBASIC5.2□□□□□ -1.58
CBX8Q9HC52 AL713922.2-201ENST00000619384 716 ntBASIC5.2□□□□□ -1.58
CBX8Q9HC52 CR381572.2-201ENST00000624852 397 ntBASIC5.2□□□□□ -1.58
CBX8Q9HC52 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CBX8Q9HC52 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.2□□□□□ -1.58
CBX8Q9HC52 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
CBX8Q9HC52 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.2□□□□□ -1.58
CBX8Q9HC52 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CBX8Q9HC52 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CBX8Q9HC52 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CBX8Q9HC52 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CBX8Q9HC52 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 RNU1-108P-201ENST00000362556 161 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CBX8Q9HC52 RNU6-331P-201ENST00000384724 107 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 RNA5SP219-201ENST00000390940 113 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL445189.1-201ENST00000405722 338 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 RNU4-65P-201ENST00000410473 140 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 RPS12P24-201ENST00000412619 387 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 UBE2FP1-201ENST00000416536 447 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 RPL7P10-201ENST00000417407 739 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 EIF4EP1-201ENST00000422311 642 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC018865.2-201ENST00000423631 129 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL772161.1-201ENST00000439130 476 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL035666.1-201ENST00000446195 348 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 DYNLL1P5-201ENST00000467158 270 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 RN7SL826P-201ENST00000479724 288 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC012158.1-204ENST00000483430 465 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC093270.2-201ENST00000486157 792 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 SNRPCP2-201ENST00000504370 475 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 HIGD1AP3-201ENST00000515857 278 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 RN7SKP82-201ENST00000516786 223 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 HMGN1P28-201ENST00000521340 364 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 COX6CP5-201ENST00000527162 228 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC133555.2-201ENST00000550213 292 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 MIR4680-201ENST00000580906 66 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL355812.1-201ENST00000603215 216 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC020910.3-201ENST00000603701 874 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL670379.6-201ENST00000603753 252 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC008162.1-201ENST00000604718 254 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL670379.1-201ENST00000604752 252 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL670379.5-201ENST00000605253 252 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL670379.8-201ENST00000605353 252 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL670379.7-201ENST00000605823 252 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 MIR6820-201ENST00000611508 62 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC090510.2-201ENST00000617465 629 ntBASIC5.19□□□□□ -1.58
CBX8Q9HC52 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CBX8Q9HC52 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.19□□□□□ -1.58
CBX8Q9HC52 AC027228.2-201ENST00000567141 2154 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CBX8Q9HC52 AL137003.2-201ENST00000606924 2538 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.18□□□□□ -1.58
CBX8Q9HC52 XIAPP3-201ENST00000312918 795 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CBX8Q9HC52 RNU6-146P-201ENST00000384602 108 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 RNU6-1106P-201ENST00000390845 107 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 MIR450B-201ENST00000401182 78 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 AL133270.1-201ENST00000402635 279 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 MIR548F4-201ENST00000408515 105 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 Y_RNA.646-201ENST00000410980 101 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 AC092447.6-201ENST00000414578 210 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.18□□□□□ -1.58
CBX8Q9HC52 AC108059.2-201ENST00000434626 151 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.18□□□□□ -1.58
CBX8Q9HC52 RPL23AP33-201ENST00000442301 452 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.18□□□□□ -1.58
CBX8Q9HC52 AL162388.1-201ENST00000450912 352 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 MIR2053-201ENST00000459295 91 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 RPL23AP55-201ENST00000498163 452 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CBX8Q9HC52 RNU6-1213P-201ENST00000517075 94 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 RANP3-201ENST00000530970 276 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.18□□□□□ -1.58
CBX8Q9HC52 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.18□□□□□ -1.58
CBX8Q9HC52 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CBX8Q9HC52 HMGB2P1-201ENST00000591146 634 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 VN1R107P-201ENST00000601784 209 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 AC093799.2-201ENST00000610062 578 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 TUG1_2.1-201ENST00000614234 87 ntBASIC5.18□□□□□ -1.58
CBX8Q9HC52 AL355365.1-201ENST00000616480 294 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms