Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC007458.1-201ENST00000542812 373 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AC087465.1-201ENST00000560574 245 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 MIR3922-201ENST00000585192 84 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AC006130.2-201ENST00000586202 326 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 RPL23AP88-201ENST00000605759 454 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AC079395.3-201ENST00000615161 484 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AC138932.5-201ENST00000617759 563 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AC244100.1-202ENST00000621554 382 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AC009039.2-201ENST00000624524 529 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 MIR622-201ENST00000638396 96 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AL161912.2-201ENST00000565707 3007 ntBASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.96□□□□□ -2.1
SND1-IT1Q9HBX3 AL049781.1-201ENST00000623195 3585 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC073325.2-201ENST00000339545 159 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 RNU1-35P-201ENST00000362782 153 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 RNA5SP515-201ENST00000364570 118 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 SNORA7.4-201ENST00000384249 137 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 MIR181A2-201ENST00000384863 110 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AL512633.1-201ENST00000399931 655 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AL357075.1-201ENST00000404107 726 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 SNORA11B-201ENST00000408175 129 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 RN7SKP202-201ENST00000410439 330 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 RNU6-516P-201ENST00000411381 104 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 VN1R51P-201ENST00000411675 945 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AL513331.1-201ENST00000411908 397 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 MTATP6P20-201ENST00000414147 562 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 BX119904.4-201ENST00000424402 301 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC091286.1-201ENST00000431233 461 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 RPL36AP6-201ENST00000435770 321 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 RPL21P2-201ENST00000440049 481 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 RPL23AP20-201ENST00000447965 421 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AL133547.1-201ENST00000448546 220 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 MTND1P31-201ENST00000449206 961 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AL162389.1-201ENST00000449233 177 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 RN7SL863P-201ENST00000462370 296 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC109925.1-201ENST00000478069 331 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC104982.1-201ENST00000478775 574 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 PRELID3BP6-201ENST00000503839 571 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 SNORA9.3-201ENST00000516383 129 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AP000857.1-201ENST00000532151 543 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC009712.1-201ENST00000564938 316 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC005951.2-201ENST00000576282 495 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC090186.1-201ENST00000605991 572 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AL627309.6-201ENST00000606857 840 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC090115.4-201ENST00000609970 188 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC245297.2-201ENST00000610119 565 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 MIR6748-201ENST00000610433 71 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC007318.2-201ENST00000620999 243 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC004808.1-201ENST00000627671 721 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 CCT4P2-201ENST00000233836 1548 ntBASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.95□□□□□ -2.1
SND1-IT1Q9HBX3 AC099786.3-201ENST00000565735 1410 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 RNU1-33P-201ENST00000364249 162 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 SNORA68.1-201ENST00000364537 132 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 RN7SKP226-201ENST00000364912 300 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 RNU6-744P-201ENST00000365557 107 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 SET-203ENST00000372688 801 ntTSL 2 BASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 RNU6-1316P-201ENST00000384242 108 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 RNU6-114P-201ENST00000384704 105 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 MIR490-201ENST00000384865 128 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 U3.20-201ENST00000390909 217 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 MIR888-201ENST00000401186 77 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 ERHP2-201ENST00000402323 299 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 RAB28P1-201ENST00000411517 641 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 RPL19P1-201ENST00000411635 428 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 MTCYBP38-201ENST00000417160 1123 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 HMGB1P49-201ENST00000418882 569 ntBASIC1.94□□□□□ -2.1
SND1-IT1Q9HBX3 AL451054.2-201ENST00000420896 202 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms