Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 MAPK10-303ENST00000641324 3959 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 KPNA2P1-201ENST00000458289 1591 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.149-201ENST00000363558 117 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.364-201ENST00000365532 101 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-1032P-201ENST00000384100 107 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-890P-201ENST00000384121 107 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-432P-201ENST00000384196 109 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 U3.30-201ENST00000391308 210 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AL592291.1-201ENST00000403830 352 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AL080315.1-201ENST00000406055 466 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RNU2-47P-201ENST00000410649 186 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RNU4-46P-201ENST00000410818 138 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC114482.1-201ENST00000418010 247 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RPS15AP40-201ENST00000419621 391 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AL049745.1-201ENST00000433953 286 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC005094.1-201ENST00000440420 368 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RPS15AP27-201ENST00000449183 343 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RPL21P8-201ENST00000465083 535 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC092324.1-201ENST00000468671 324 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC104472.2-201ENST00000469035 601 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC108751.2-201ENST00000469993 231 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC008526.1-201ENST00000509149 338 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-1092P-201ENST00000516955 87 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-794P-201ENST00000517261 64 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AP001880.2-201ENST00000538233 448 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC022726.1-201ENST00000587475 207 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AL008729.2-201ENST00000606393 473 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AL442067.1-201ENST00000613261 223 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 MIR6128-201ENST00000615528 109 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AC123768.4-201ENST00000616244 701 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 U4.1-201ENST00000620349 87 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 AL162373.1-201ENST00000620433 407 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 CR381572.2-201ENST00000624852 397 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 ZNF519P1-201ENST00000449011 1626 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 MTND5P30-201ENST00000452896 1731 ntBASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SEC61A2Q9H9S3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 SNORA75B-201ENST00000384053 137 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 RNU1-82P-201ENST00000390851 165 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 RNU11-4P-201ENST00000391149 133 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AL133270.1-201ENST00000402635 279 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 RNA5SP113-201ENST00000410486 84 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 HMGB3P2-201ENST00000411913 584 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AC018865.2-201ENST00000423631 129 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 EZH2P1-201ENST00000431167 291 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 RPL7P28-201ENST00000437739 740 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 RPL21P23-201ENST00000446654 460 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AC239809.1-201ENST00000450470 217 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 RPL10P17-201ENST00000453852 316 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AURKAPS2-201ENST00000454983 333 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 RPL36AP13-201ENST00000457490 317 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 AC006967.1-201ENST00000467608 589 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 HIGD1AP13-201ENST00000509878 289 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 MTCO3P44-201ENST00000510977 541 ntBASIC4.22□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-123P-201ENST00000516163 102 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms