Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 SNORD11.1-201ENST00000459482 85 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC005410.1-202ENST00000460347 485 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC020699.1-201ENST00000505161 445 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 ARL4AP2-201ENST00000507378 601 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 KLHL2P1-201ENST00000508691 521 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC022690.1-201ENST00000526681 550 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AP001189.2-201ENST00000527320 189 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 MTND1P24-201ENST00000552175 861 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AADACP1-206ENST00000561502 1193 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC009097.3-201ENST00000563557 1018 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AGGF1P5-201ENST00000567900 919 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC010653.1-201ENST00000571108 881 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC002076.2-201ENST00000617362 122 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC073348.1-201ENST00000623002 331 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AP000676.4-201ENST00000624659 623 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 MKKS-204ENST00000639674 192 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 GDI2P1-201ENST00000429312 1336 ntBASIC2.84□□□□□ -1.96
NXF3Q9H4D5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.84□□□□□ -1.96
NXF3Q9H4D5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 NUP58P1-201ENST00000502546 1738 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 RNU6-560P-201ENST00000364007 108 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 RNU6-636P-201ENST00000384598 107 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 RPLP0P7-201ENST00000416050 667 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 MRPS36P1-201ENST00000421291 307 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 MTCO3P1-205ENST00000422088 832 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 RABEPKP1-201ENST00000440529 1026 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 PABPC1P3-201ENST00000469174 459 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC108734.3-201ENST00000481241 1165 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 RNU6-311P-201ENST00000516224 102 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 RN7SKP31-201ENST00000516354 278 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC100870.1-201ENST00000522035 505 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AP000857.1-201ENST00000532151 543 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC007536.1-201ENST00000533382 349 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AL391156.1-201ENST00000554965 554 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC027176.1-201ENST00000560204 514 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC090695.1-201ENST00000561269 1222 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC023813.2-201ENST00000564321 469 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AP001269.3-201ENST00000588718 329 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 MTND3P19-201ENST00000603825 345 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC009220.3-201ENST00000604318 586 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC055876.5-201ENST00000605667 259 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC091946.2-201ENST00000606105 291 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AC084035.1-201ENST00000634543 607 ntBASIC2.83□□□□□ -1.96
NXF3Q9H4D5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NXF3Q9H4D5 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 SNORD116.1-201ENST00000365628 92 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 RNU6-1242P-201ENST00000391052 103 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 CYCSP45-201ENST00000402289 315 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 ATG3P1-201ENST00000419507 911 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AL513328.1-201ENST00000446460 224 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 MTCO2P25-201ENST00000447065 681 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 MTCO1P48-201ENST00000448024 1096 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 CACYBPP2-201ENST00000453625 678 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 RNU6-1225P-201ENST00000516336 65 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 RNU6-56P-201ENST00000516986 93 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 RNU6-1261P-201ENST00000517194 104 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 UBTFL10-201ENST00000528532 562 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AC243972.3-201ENST00000539655 198 ntBASIC2.82□□□□□ -1.96
NXF3Q9H4D5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms