Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AL161631.1-201ENST00000417933 486 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RPL7AP25-201ENST00000423357 805 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RPL29P29-201ENST00000448725 423 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RPL21P103-201ENST00000479921 488 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RN7SL812P-201ENST00000493791 279 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC104164.2-201ENST00000496953 495 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC116562.3-201ENST00000506136 177 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-64P-201ENST00000517119 105 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC068587.5-201ENST00000528506 175 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 OR5B19P-201ENST00000531766 928 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC068831.4-201ENST00000556118 109 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC007224.1-201ENST00000564410 144 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AP001029.3-201ENST00000588063 596 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 AP001429.1-201ENST00000602568 530 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 TUG1_1.1-201ENST00000610654 145 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 FAM91A3P-201ENST00000456826 2544 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RIOK3P1-201ENST00000418778 1528 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RAD17P1-201ENST00000418130 2042 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 Y_RNA.356-201ENST00000365475 113 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 BEND7P1-201ENST00000422058 457 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 MTCYBP8-201ENST00000422855 651 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC073415.1-201ENST00000449240 153 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC234775.1-201ENST00000454247 670 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 DHFRP3-201ENST00000455595 559 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 RPL36AP13-201ENST00000457490 317 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 RNU7-182P-201ENST00000459009 62 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC010618.1-201ENST00000469924 477 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 RPS15AP36-201ENST00000492022 382 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 EIF4EP3-201ENST00000498782 656 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 RPL38P4-201ENST00000502376 214 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 SUB1P1-201ENST00000524415 382 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AL138976.2-201ENST00000563989 694 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 MIR4775-201ENST00000581168 75 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC013553.2-201ENST00000604244 589 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC128687.2-201ENST00000609657 566 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC009233.1-201ENST00000616477 371 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 U73479.1-201ENST00000618062 168 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AP005019.3-201ENST00000620418 560 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AL136221.1-201ENST00000621449 509 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC100810.6-201ENST00000638068 285 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 OR52H1-202ENST00000641796 1061 ntBASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AMBRA1Q9C0C7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 AC093908.1-201ENST00000623125 8092 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 MTND5P17-201ENST00000418405 1603 ntBASIC3.97□□□□□ -1.77
AMBRA1Q9C0C7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms