Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 BEND7P1-201ENST00000422058 457 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC019178.2-201ENST00000423595 505 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 DEFB130D-201ENST00000426866 237 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AL365496.1-201ENST00000426885 215 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 TAAR7P-201ENST00000436141 242 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 MTCYBP3-201ENST00000445588 1137 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AL139109.1-201ENST00000455491 297 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 RNU6-420P-201ENST00000458780 107 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC087588.1-201ENST00000462203 316 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AL049874.1-201ENST00000489560 388 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 OR4G11P-201ENST00000492842 939 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC006518.2-201ENST00000542513 940 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 MTCYBP27-201ENST00000555160 670 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 ZNF971P-201ENST00000562068 1249 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC079148.1-201ENST00000565944 819 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AP003973.1-201ENST00000604639 691 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC012467.1-201ENST00000607740 256 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 U6.101-201ENST00000637707 76 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 SNORD62.1-201ENST00000362541 86 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 RNU6-492P-201ENST00000363035 104 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 RNU6-1035P-201ENST00000384477 107 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC099548.1-201ENST00000421443 426 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC091390.3-201ENST00000426478 338 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 UBE2FP3-201ENST00000436366 524 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC009237.8-201ENST00000445492 379 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 DDX3P2-201ENST00000446138 111 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 IFNA11P-201ENST00000446352 526 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 snoU13.22-201ENST00000459428 104 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 KLRA1P-201ENST00000503499 986 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC002456.2-201ENST00000509356 380 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 HIGD1AP13-201ENST00000509878 289 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC109329.2-201ENST00000519658 482 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 GLYCAM1-201ENST00000546596 285 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AL138976.2-201ENST00000563989 694 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 RPS3AP23-202ENST00000574601 686 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 MIR4658-201ENST00000584344 65 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 NRBF2P5-201ENST00000603087 788 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 YPEL5P2-201ENST00000605553 359 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC067747.1-201ENST00000608026 250 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC004852.3-201ENST00000614131 326 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 AC097460.3-201ENST00000623099 442 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 HPVC1-201ENST00000629899 1198 ntBASIC1.89□□□□□ -2.11
NKX6-2Q9C056 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NKX6-2Q9C056 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.88□□□□□ -2.11
NKX6-2Q9C056 SDAD1P2-201ENST00000441308 2028 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NKX6-2Q9C056 HMGB1P5-201ENST00000255320 642 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NKX6-2Q9C056 RNU1-112P-201ENST00000364401 164 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 U3.20-201ENST00000390909 217 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.88□□□□□ -2.11
NKX6-2Q9C056 RPL35AP12-201ENST00000425362 338 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 Z93242.1-201ENST00000427102 353 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 GTF2IP20-201ENST00000431663 360 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 AL714022.1-201ENST00000439897 151 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 RPS24P13-201ENST00000442520 397 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.88□□□□□ -2.11
NKX6-2Q9C056 USP9YP34-201ENST00000453983 808 ntBASIC1.88□□□□□ -2.11
NKX6-2Q9C056 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NKX6-2Q9C056 AC116337.2-201ENST00000477662 156 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms