Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNU6-1078P-201ENST00000364522 103 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 RNA5SP505-201ENST00000364748 108 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 Y_RNA.482-201ENST00000384377 111 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 RNU6-331P-201ENST00000384724 107 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 Y_RNA.576-201ENST00000384781 102 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 RNU6-907P-201ENST00000390924 102 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 EIF4E2P1-201ENST00000393781 255 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 RNU4-46P-201ENST00000410818 138 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 RNU6-954P-201ENST00000411355 107 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 RNU6-603P-201ENST00000411403 107 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 POLHP1-201ENST00000411806 470 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC114491.1-201ENST00000416095 246 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 SKA2P1-201ENST00000425592 390 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC005019.1-201ENST00000436455 431 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC005094.1-201ENST00000440420 368 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 MTND1P17-201ENST00000448961 204 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC239809.1-201ENST00000450470 217 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 RNA5SP392-201ENST00000516905 112 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 RNU6-1137P-201ENST00000517073 99 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 OR11H5P-201ENST00000554039 926 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 MIR3667-201ENST00000581025 74 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 MIR3668-201ENST00000582138 75 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 MIR4503-201ENST00000582187 83 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 MIR4293-201ENST00000584305 78 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC023043.2-201ENST00000589678 1026 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC234771.5-201ENST00000600161 514 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC092747.3-201ENST00000603769 301 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC012443.1-201ENST00000605605 231 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC098657.3-201ENST00000620434 263 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AC008013.2-202ENST00000637965 364 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 LINC01355-201ENST00000566551 5444 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 AL672167.1-205ENST00000641112 3080 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 PHKBP1-201ENST00000450951 1951 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 ZNF734P-201ENST00000419494 1534 ntBASIC4.87□□□□□ -1.63
FOXP3Q9BZS1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 Y_RNA.148-201ENST00000363557 117 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 Y_RNA.401-201ENST00000383965 117 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RNU6-1106P-201ENST00000390845 107 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AL121834.1-202ENST00000404494 277 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 HDGFP1-201ENST00000405943 252 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RPS16P5-201ENST00000406501 404 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RNU2-50P-201ENST00000410494 143 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RNA5SP107-201ENST00000411358 122 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RPL31P12-201ENST00000422587 358 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RPL7P46-201ENST00000425129 740 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 EIF4A1P11-201ENST00000451239 222 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 SNORD97-201ENST00000459187 142 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RN7SL354P-201ENST00000469282 294 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 RPS27P27-201ENST00000498779 255 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC093249.4-201ENST00000564755 259 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AF038458.1-201ENST00000588406 262 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 VN1R107P-201ENST00000601784 209 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC087588.2-201ENST00000617667 426 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 AC015813.6-201ENST00000624409 5808 ntBASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
FOXP3Q9BZS1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms