Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 LARP7P2-201ENST00000575306 125 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AP001029.3-201ENST00000588063 596 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC010620.2-201ENST00000600135 313 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 VIS1.1-201ENST00000610517 203 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC007275.1-201ENST00000621243 671 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC109454.4-201ENST00000623411 649 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC079228.1-201ENST00000624774 1049 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC126544.2-201ENST00000625174 749 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 MFSD8-245ENST00000641743 948 ntBASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.04□□□□□ -1.92
RPAP1Q9BWH6 AC002546.1-201ENST00000588041 2504 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AL136520.1-201ENST00000600311 1322 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 FRG1BP-201ENST00000278882 761 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 RNU6-707P-201ENST00000364647 95 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AL079342.2-201ENST00000403367 482 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AL591034.1-201ENST00000407447 340 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 LUZP4P1-201ENST00000415420 344 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 HSPE1P1-201ENST00000421494 318 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 UBE2D3P1-201ENST00000436669 444 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 WASF1P1-201ENST00000447560 1131 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AC008427.1-201ENST00000503102 655 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 MLLT10P2-201ENST00000506434 249 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 CKS1BP7-201ENST00000522230 235 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 SNRPGP16-201ENST00000533275 226 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AC068339.2-201ENST00000534395 618 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 DNAJC19P3-201ENST00000594491 331 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AL356575.1-201ENST00000603008 283 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AL109653.1-201ENST00000603091 248 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AP001330.4-201ENST00000604350 154 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AP001521.1-201ENST00000609150 300 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AL390240.1-201ENST00000612950 384 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AC095031.1-201ENST00000623685 672 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 AP006437.1-201ENST00000641440 3685 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.03□□□□□ -1.92
RPAP1Q9BWH6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
RPAP1Q9BWH6 SGO1P2-201ENST00000429458 1589 ntBASIC3.03□□□□□ -1.93
RPAP1Q9BWH6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 MIR6073-201ENST00000352083 89 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 RNU2-15P-201ENST00000410692 191 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 PTP4A1P7-201ENST00000423476 514 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 C1DP1-201ENST00000426049 402 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 VN1R10P-201ENST00000447106 875 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AC092757.1-201ENST00000467293 467 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AC104629.1-201ENST00000494226 508 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AC105914.1-201ENST00000511798 226 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 MTND5P4-201ENST00000514978 288 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 MIR5708-201ENST00000579723 85 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 SNORD84-203ENST00000584275 78 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AL158827.2-201ENST00000602494 330 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AC098826.3-201ENST00000603823 466 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AC010738.1-201ENST00000604970 987 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AL450472.3-201ENST00000615578 367 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AL691447.3-201ENST00000635020 330 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AC016717.2-201ENST00000609089 5141 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 AL136164.4-201ENST00000625013 2135 ntBASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
RPAP1Q9BWH6 Z99496.1-201ENST00000469424 1477 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 RNA5SP456-201ENST00000364002 114 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 SNORD51-201ENST00000384320 80 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 CYCSP45-201ENST00000402289 315 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC096533.1-201ENST00000411645 353 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 USP9YP21-201ENST00000420603 432 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 DPRXP1-201ENST00000426312 460 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 MTCO1P3-201ENST00000429327 192 ntBASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.01□□□□□ -1.93
RPAP1Q9BWH6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms