Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
UPK3BQ9BT76 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
UPK3BQ9BT76 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.89□□□□□ -2.11
UPK3BQ9BT76 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.89□□□□□ -2.11
UPK3BQ9BT76 AC010680.1-201ENST00000590024 3590 ntBASIC1.89□□□□□ -2.11
UPK3BQ9BT76 AC092593.1-201ENST00000515413 1815 ntBASIC1.89□□□□□ -2.11
UPK3BQ9BT76 AC012321.1-201ENST00000561622 1588 ntBASIC1.89□□□□□ -2.11
UPK3BQ9BT76 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.89□□□□□ -2.11
UPK3BQ9BT76 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 RNU5B-1-201ENST00000363286 116 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 DEFA7P-201ENST00000382676 285 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 MIR592-201ENST00000384959 97 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 MIR627-201ENST00000384979 97 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AL590383.1-201ENST00000428602 75 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 MTND2P5-201ENST00000432656 1006 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC236972.1-201ENST00000433225 199 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 RPL26P6-201ENST00000440913 438 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 RNF2P1-201ENST00000442955 1010 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC009237.8-201ENST00000445492 379 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 RPL31P50-201ENST00000471002 296 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 OR4G11P-201ENST00000492842 939 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 RPS27P26-201ENST00000494583 239 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 OR5BM1P-201ENST00000512021 366 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC034159.1-201ENST00000513885 583 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC022483.1-201ENST00000514020 567 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 RNU6-928P-201ENST00000516876 104 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AP001189.2-201ENST00000527320 189 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC087276.1-201ENST00000529659 480 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 CYB5AP5-201ENST00000549779 389 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 HMGB1P6-201ENST00000569046 646 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 MIR4513-201ENST00000581077 86 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AL020991.1-201ENST00000612314 373 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC093875.1-201ENST00000623688 504 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 AC093536.2-201ENST00000565257 1406 ntBASIC1.88□□□□□ -2.11
UPK3BQ9BT76 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.88□□□□□ -2.11
UPK3BQ9BT76 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 MIR6073-201ENST00000352083 89 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 RNU5A-1-201ENST00000362698 116 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 RNU6-207P-201ENST00000384137 107 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 Y_RNA.500-201ENST00000384466 111 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 SNRPEP2-201ENST00000397592 279 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 RPS4XP7-201ENST00000406274 780 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AL365496.1-201ENST00000426885 215 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 UBE2D3P3-201ENST00000426992 425 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AL590233.1-201ENST00000430017 456 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AL353691.1-201ENST00000451332 387 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 MTCO3P11-201ENST00000455103 774 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 SNORD109B-201ENST00000458961 67 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 SNORD109A-201ENST00000459128 67 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC003982.1-202ENST00000469928 248 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC023424.2-201ENST00000493479 777 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 MTCO2P9-201ENST00000503214 694 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC008716.1-201ENST00000511084 513 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 RNU5A-7P-201ENST00000515979 116 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 RN7SKP132-201ENST00000516001 208 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 RNU6-334P-201ENST00000517072 102 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 RNA5SP402-201ENST00000517148 110 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC007954.1-201ENST00000554198 494 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC103810.1-201ENST00000579873 453 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 MIR4672-201ENST00000583126 81 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AL160237.3-201ENST00000604114 1013 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AL161734.1-201ENST00000609720 557 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AC006213.4-201ENST00000616184 634 ntBASIC1.87□□□□□ -2.11
UPK3BQ9BT76 AL355493.4-201ENST00000618530 292 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms