Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL133153.1-201ENST00000557756 303 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AC007684.1-201ENST00000609671 477 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 MIR7975-201ENST00000619350 68 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 CR381653.2-201ENST00000624041 768 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AC124864.2-201ENST00000624736 186 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PAAF1Q9BRP4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.9□□□□□ -1.78
PAAF1Q9BRP4 PRO1804-201ENST00000623780 2050 ntBASIC3.9□□□□□ -1.78
PAAF1Q9BRP4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
PAAF1Q9BRP4 DDX10P1-201ENST00000448545 1933 ntBASIC3.9□□□□□ -1.78
PAAF1Q9BRP4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 OR1S2-201ENST00000302592 978 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 RNVU1-14-201ENST00000384770 164 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 MIR93-201ENST00000385024 80 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 RNU4-55P-201ENST00000410731 137 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 UBE2FP1-201ENST00000416536 447 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC073587.1-201ENST00000447093 876 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 NPM1P49-201ENST00000448027 714 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 PSPHP1-201ENST00000450062 261 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC093899.1-201ENST00000457984 376 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AL049714.1-201ENST00000466686 347 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC023194.1-201ENST00000493084 308 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC074250.1-201ENST00000511117 192 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC021146.1-201ENST00000511202 716 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 RNA5SP154-201ENST00000516193 111 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 SNORA31.20-201ENST00000517111 133 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC011979.2-201ENST00000527568 352 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AL034351.1-201ENST00000605288 668 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC126118.1-201ENST00000607744 628 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AC096577.2-201ENST00000611455 153 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 AL603758.1-201ENST00000618654 241 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PAAF1Q9BRP4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 RNU6-223P-201ENST00000362830 107 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 RNU6-181P-201ENST00000363225 107 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 SNORD74.4-201ENST00000364129 80 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 RNU6-629P-201ENST00000384061 103 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 RNU6-456P-201ENST00000384493 107 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 MIR34B-201ENST00000385076 84 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 RNU6-754P-201ENST00000391166 107 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 MTND3P17-201ENST00000416968 344 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AC002486.1-201ENST00000435098 391 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AC004866.2-201ENST00000438285 481 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 SNORD105B-201ENST00000458770 79 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AC008155.2-201ENST00000464337 397 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 RPS15AP36-201ENST00000492022 382 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AC068305.1-201ENST00000497406 726 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 Vault.1-201ENST00000516474 102 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 RNU6-445P-201ENST00000516949 107 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 MTND4LP26-201ENST00000518144 282 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 FAM92A1P1-201ENST00000528023 890 ntBASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.89□□□□□ -1.79
PAAF1Q9BRP4 AC107016.1-201ENST00000550463 337 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms