Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 RNA5SP456-201ENST00000364002 114 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 RNU1-112P-201ENST00000364401 164 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 SNORA70.2-201ENST00000364506 135 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 RNU6-19P-201ENST00000384718 107 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AL139039.1-201ENST00000401900 692 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AL591416.1-201ENST00000404015 867 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AL138885.1-201ENST00000405921 675 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 LINC01347-201ENST00000417964 355 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC004975.1-201ENST00000428733 208 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC012497.1-201ENST00000429392 575 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 SDR42E1P3-201ENST00000438345 502 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC009237.8-201ENST00000445492 379 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 PDSS1P2-201ENST00000449397 678 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC080013.2-201ENST00000460866 323 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC140059.1-201ENST00000489238 361 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 RPS29P20-201ENST00000489592 171 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC093281.2-201ENST00000510153 597 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 HMGN1P28-201ENST00000521340 364 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC084824.1-201ENST00000550917 1005 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC087465.1-201ENST00000560574 245 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC006539.2-201ENST00000601729 572 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC067747.1-201ENST00000608026 250 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AL159169.3-201ENST00000608871 561 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 MIR7112-201ENST00000616126 65 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 U4atac.1-201ENST00000618345 95 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 AL109659.3-201ENST00000624985 950 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 MKKS-204ENST00000639674 192 ntBASIC1.45□□□□□ -2.18
VPS25Q9BRG1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
VPS25Q9BRG1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 MIR422A-201ENST00000362286 90 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 RNU6-1155P-201ENST00000363554 107 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 RNA5SP363-201ENST00000365072 115 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 RNU6-1083P-201ENST00000384022 107 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 SNORA18.3-201ENST00000384122 132 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 MIR200C-201ENST00000384980 68 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AL356057.3-201ENST00000402607 340 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 RPL7P27-201ENST00000403775 720 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AL133384.1-201ENST00000412744 351 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC005326.1-201ENST00000429197 123 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 DNAJC19P4-201ENST00000440115 345 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 MTCO3P17-201ENST00000443775 513 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC005297.2-201ENST00000450430 606 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC026427.2-201ENST00000506228 536 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC114786.4-201ENST00000508771 728 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC114797.1-201ENST00000514003 728 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 OR5AK3P-201ENST00000527486 1297 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 OR4P1P-201ENST00000530808 1136 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC011611.5-201ENST00000552477 578 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 MIR3199-1-201ENST00000582434 88 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AL137246.1-201ENST00000607072 977 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AC003001.2-201ENST00000616294 831 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 ATP5A1P2-202ENST00000616464 443 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 U4.3-201ENST00000621047 82 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 AL355480.1-201ENST00000629041 99 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 ZNF663P-202ENST00000641770 1131 ntBASIC1.44□□□□□ -2.18
VPS25Q9BRG1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS25Q9BRG1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 SNORA38.1-201ENST00000364172 131 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 OR1L1-202ENST00000373686 1083 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 RNU6-1151P-201ENST00000384684 107 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 RNU6-882P-201ENST00000391025 103 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 RNU6-272P-201ENST00000411028 104 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 VTA1P1-201ENST00000414044 866 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 SPA17P1-201ENST00000416656 452 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS25Q9BRG1 RNF19BPX-201ENST00000426224 625 ntBASIC1.43□□□□□ -2.18
VPS25Q9BRG1 AL512844.2-201ENST00000433990 593 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms