Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AL117336.2-201ENST00000602435 335 ntBASIC3.16□□□□□ -1.9
DUX3Q96PT4 AC025253.1-201ENST00000613623 543 ntBASIC3.16□□□□□ -1.9
DUX3Q96PT4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.16□□□□□ -1.9
DUX3Q96PT4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.16□□□□□ -1.9
DUX3Q96PT4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.16□□□□□ -1.9
DUX3Q96PT4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
DUX3Q96PT4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DUX3Q96PT4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DUX3Q96PT4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DUX3Q96PT4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.16□□□□□ -1.9
DUX3Q96PT4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.16□□□□□ -1.9
DUX3Q96PT4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.16□□□□□ -1.9
DUX3Q96PT4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.16□□□□□ -1.9
DUX3Q96PT4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
DUX3Q96PT4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DUX3Q96PT4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
DUX3Q96PT4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
DUX3Q96PT4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DUX3Q96PT4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
DUX3Q96PT4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DUX3Q96PT4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
DUX3Q96PT4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.15□□□□□ -1.9
DUX3Q96PT4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DUX3Q96PT4 Y_RNA.86-201ENST00000363020 111 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 RNU6-877P-201ENST00000383868 107 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 RNU6-1158P-201ENST00000391167 107 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 HSPE1P26-201ENST00000405341 275 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 RN7SKP202-201ENST00000410439 330 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 RNU6-1068P-201ENST00000410958 103 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 OR51A5P-201ENST00000415429 942 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 MTCO3P12-201ENST00000416718 547 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 RPS15AP40-201ENST00000419621 391 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 HMGB3P12-201ENST00000438745 556 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 BNIP3P2-201ENST00000441221 577 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AL049830.2-201ENST00000480072 201 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC023194.1-201ENST00000493084 308 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 RPL29P14-201ENST00000495837 428 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC078918.1-201ENST00000498515 228 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC021146.1-201ENST00000511202 716 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC010493.1-201ENST00000513479 292 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 RNA5SP401-201ENST00000515920 127 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 RNA5SP337-201ENST00000517007 109 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DUX3Q96PT4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC063950.1-201ENST00000552036 308 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC124068.1-201ENST00000563131 678 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 CYP4A43P-201ENST00000568156 121 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC025627.2-201ENST00000576220 160 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC053481.4-201ENST00000583164 216 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AL353997.4-201ENST00000586196 166 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 NRBF2P1-201ENST00000587407 859 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC060780.3-201ENST00000589464 80 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 MIR6864-201ENST00000617935 70 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC005858.4-201ENST00000623191 700 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 AC112487.2-201ENST00000637950 304 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
DUX3Q96PT4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DUX3Q96PT4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.15□□□□□ -1.91
DUX3Q96PT4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.15□□□□□ -1.91
DUX3Q96PT4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.14□□□□□ -1.91
DUX3Q96PT4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DUX3Q96PT4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DUX3Q96PT4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
DUX3Q96PT4 AL353746.1-201ENST00000566293 6881 ntBASIC3.14□□□□□ -1.91
DUX3Q96PT4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
DUX3Q96PT4 AL161781.1-201ENST00000354277 403 ntBASIC3.14□□□□□ -1.91
DUX3Q96PT4 SNORA31-201ENST00000362607 130 ntBASIC3.14□□□□□ -1.91
DUX3Q96PT4 MIR554-201ENST00000384874 96 ntBASIC3.14□□□□□ -1.91
DUX3Q96PT4 SNORA48.7-201ENST00000391302 135 ntBASIC3.14□□□□□ -1.91
DUX3Q96PT4 SSXP10-201ENST00000402595 565 ntBASIC3.14□□□□□ -1.91
DUX3Q96PT4 AL445189.1-201ENST00000405722 338 ntBASIC3.14□□□□□ -1.91
DUX3Q96PT4 AC007390.1-201ENST00000415722 356 ntBASIC3.14□□□□□ -1.91
DUX3Q96PT4 NUP35P2-201ENST00000416748 943 ntBASIC3.14□□□□□ -1.91
DUX3Q96PT4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.14□□□□□ -1.91
DUX3Q96PT4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms