Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 RNU6-1242P-201ENST00000391052 103 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 RPL5P18-201ENST00000406671 891 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 SETP8-201ENST00000435341 628 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 RPS25P9-201ENST00000435591 252 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 COX7BP2-201ENST00000437976 242 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 PTENP1-201ENST00000447117 1215 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 MTND1P31-201ENST00000449206 961 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 MTND1P9-201ENST00000453775 944 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AL049714.1-201ENST00000466686 347 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 RPL31P60-201ENST00000478450 367 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AC010587.2-201ENST00000511727 448 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 SNORA31.22-201ENST00000517204 135 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 MIR4506-201ENST00000584693 77 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 MTCO2P2-201ENST00000591258 225 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AL158211.4-201ENST00000606988 584 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AC097478.2-201ENST00000610572 514 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AC016597.2-201ENST00000613256 341 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AC006213.4-201ENST00000616184 634 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF560Q96MR9 AC011460.1-201ENST00000636268 1834 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 GABRG2-229ENST00000641017 3628 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AC009487.2-201ENST00000420969 6821 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 MTND5P7-201ENST00000413558 1798 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 RNU6-1197P-201ENST00000391183 107 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 RPL17P50-201ENST00000396131 546 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 ELOCP9-201ENST00000418624 239 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AL139132.1-201ENST00000431587 344 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 MTCO2P20-201ENST00000437339 673 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 MEMO1P3-201ENST00000459811 302 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 RPL30P9-201ENST00000465586 330 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 RPL7P18-201ENST00000478965 734 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AC024589.1-201ENST00000512207 263 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AC245166.1-201ENST00000521012 253 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AC015871.2-201ENST00000603605 948 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AL133507.1-201ENST00000605269 557 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AC080013.3-201ENST00000606839 578 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 MIR4275-201ENST00000636486 87 ntBASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ZNF560Q96MR9 AC008264.2-201ENST00000610193 3731 ntBASIC3.15□□□□□ -1.9
ZNF560Q96MR9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ZNF560Q96MR9 AC092447.10-201ENST00000620607 1652 ntBASIC3.15□□□□□ -1.9
ZNF560Q96MR9 RNU6-97P-201ENST00000363387 104 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 RNU6-584P-201ENST00000410350 95 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 PPP1R11P2-201ENST00000423543 382 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 HSPE1P6-201ENST00000479457 291 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AC111000.2-201ENST00000507775 550 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 GMPSP1-201ENST00000514075 579 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AC026801.2-201ENST00000515352 425 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AP003497.1-201ENST00000528472 562 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AC125611.2-201ENST00000551907 647 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 HSPE1P7-201ENST00000604681 321 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AL592221.1-201ENST00000605266 382 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 AC027309.3-201ENST00000623419 351 ntBASIC3.15□□□□□ -1.91
ZNF560Q96MR9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.15□□□□□ -1.91
ZNF560Q96MR9 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms