Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 BNIP3P24-201ENST00000593398 557 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AP001330.4-201ENST00000604350 154 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AL390208.1-201ENST00000605885 644 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC245297.2-201ENST00000610119 565 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC006133.1-201ENST00000617106 264 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC004009.2-201ENST00000623016 728 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 LRRC77P-213ENST00000637727 880 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC092447.7-201ENST00000422212 1621 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC00477Q96M19 SNORA4.1-201ENST00000364263 144 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 RNU6-1180P-201ENST00000364935 107 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 SNORD21-201ENST00000383953 95 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 CYCSP45-201ENST00000402289 315 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 RNU2-15P-201ENST00000410692 191 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 TPMTP2-201ENST00000414372 726 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL513477.1-202ENST00000417061 214 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 MTCO2P21-201ENST00000419780 677 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL137014.1-201ENST00000420490 1226 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL953862.1-201ENST00000423016 168 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC010099.3-201ENST00000423896 409 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL390023.1-201ENST00000428836 262 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 ZYG11AP1-201ENST00000430329 837 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL159987.2-201ENST00000432754 307 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 MTND5P14-201ENST00000441481 1267 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL353691.1-201ENST00000451332 387 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AP001992.1-205ENST00000462248 379 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC097493.1-201ENST00000463958 372 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC090453.1-201ENST00000495560 436 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 MLLT10P2-201ENST00000506434 249 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC109445.1-201ENST00000512356 383 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 MTCYBP43-201ENST00000513621 740 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 FAM60DP-201ENST00000524174 632 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC00477Q96M19 OR7K1P-201ENST00000546439 926 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 HSPE1P3-201ENST00000559254 309 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC034105.3-201ENST00000565294 442 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL354943.1-201ENST00000572103 781 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 MIR3158-1-201ENST00000583596 81 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC006504.3-201ENST00000586818 523 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL031281.1-201ENST00000604049 488 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC018714.1-201ENST00000605028 208 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC024560.3-201ENST00000608482 349 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC009039.2-201ENST00000624524 529 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC092192.1-201ENST00000633154 1018 ntBASIC2.24□□□□□ -2.05
LINC00477Q96M19 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
LINC00477Q96M19 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC00477Q96M19 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC00477Q96M19 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AC008669.1-201ENST00000565823 2178 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 FRG1BP-201ENST00000278882 761 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC00477Q96M19 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC00477Q96M19 RNU6-1122P-201ENST00000384449 107 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 MIR449B-201ENST00000384995 97 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 SNORD88.1-201ENST00000408684 91 ntBASIC2.23□□□□□ -2.05
LINC00477Q96M19 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.23□□□□□ -2.05
LINC00477Q96M19 MTND1P20-201ENST00000430341 950 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms