Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIR6852-201ENST00000621699 66 ntBASIC2.62□□□□□ -1.99
ECHDC3Q96DC8 AC092608.2-201ENST00000624427 218 ntBASIC2.62□□□□□ -1.99
ECHDC3Q96DC8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ECHDC3Q96DC8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.62□□□□□ -1.99
ECHDC3Q96DC8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.62□□□□□ -1.99
ECHDC3Q96DC8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ECHDC3Q96DC8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ECHDC3Q96DC8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 Y_RNA.25-201ENST00000362528 102 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC234781.2-201ENST00000426370 994 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AL590233.1-201ENST00000430017 456 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC109464.2-201ENST00000510242 943 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC026241.1-201ENST00000517873 2142 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC100870.1-201ENST00000522035 505 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC087894.1-201ENST00000538359 518 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 MIR4637-201ENST00000582405 84 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 MIR3609-201ENST00000582661 80 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC023043.3-201ENST00000593113 385 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC013444.2-201ENST00000603317 787 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AP000254.1-201ENST00000609934 520 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AL161629.2-201ENST00000615347 275 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC018926.1-201ENST00000616335 435 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC120349.2-201ENST00000625002 298 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC110079.1-202ENST00000635213 138 ntBASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ECHDC3Q96DC8 AC097714.1-201ENST00000511272 1647 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC087359.1-201ENST00000508335 1740 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 ANKRD36P1-201ENST00000344424 659 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 DEFB108F-201ENST00000344638 222 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 MIR196B-201ENST00000384852 84 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AL356131.1-201ENST00000405826 414 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC024082.2-201ENST00000434771 238 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 LSM1P1-201ENST00000438629 273 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 GSTA11P-201ENST00000452866 669 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 TRGVB-201ENST00000453257 471 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC234775.1-201ENST00000454247 670 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 PNPLA4P1-201ENST00000458328 305 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC090453.1-201ENST00000495560 436 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 MTCYBP16-201ENST00000509187 1129 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 CASP1P1-201ENST00000526345 212 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 DEFB108D-201ENST00000527787 222 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 NDUFS5P6-201ENST00000529136 295 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC092451.2-201ENST00000538746 658 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 MIR3921-201ENST00000577308 85 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC011260.1-201ENST00000578420 472 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC105224.1-201ENST00000587055 421 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AL445435.1-201ENST00000604232 665 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AL031176.1-201ENST00000604554 466 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC005332.6-201ENST00000613178 446 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 SNHG22-203ENST00000617833 660 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 AC010680.1-201ENST00000590024 3590 ntBASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ECHDC3Q96DC8 Z99496.1-201ENST00000469424 1477 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 SNORD62.1-201ENST00000362541 86 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 RNA5SP68-201ENST00000363885 119 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 RNU2-43P-201ENST00000410306 190 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AL356320.2-201ENST00000417263 507 ntBASIC2.59□□□□□ -1.99
ECHDC3Q96DC8 AC019178.2-201ENST00000423595 505 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms