Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RPL37P6-201ENST00000460682 294 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC233702.1-201ENST00000482905 502 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTP4A1Q93096 AL160314.1-201ENST00000490836 438 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC091951.3-201ENST00000504093 246 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 SUB1P1-201ENST00000524415 382 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AP000857.1-201ENST00000532151 543 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC006130.2-201ENST00000586202 326 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC061975.8-201ENST00000587058 721 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC068790.3-201ENST00000602988 553 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 MIR7851-201ENST00000610611 160 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AL078595.3-201ENST00000623815 1166 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTP4A1Q93096 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTP4A1Q93096 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTP4A1Q93096 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PTP4A1Q93096 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PTP4A1Q93096 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 RNY4P24-201ENST00000362735 96 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 RNA5SP383-201ENST00000362934 120 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 Y_RNA.126-201ENST00000363382 111 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 RNU6-253P-201ENST00000384730 105 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 MIR513B-201ENST00000385136 84 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 RNU6-278P-201ENST00000390945 109 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTP4A1Q93096 CCNG1P1-201ENST00000406783 885 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 RAB9AP3-201ENST00000412737 573 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 AL356968.1-201ENST00000416622 474 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 AL365496.1-201ENST00000426885 215 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC104332.2-201ENST00000429959 156 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 RAB9AP1-201ENST00000449393 573 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC097262.1-201ENST00000452559 548 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 RPL23AP41-201ENST00000484754 458 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 RPS27P26-201ENST00000494583 239 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 RNU1-45P-201ENST00000517191 141 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC023632.4-201ENST00000517783 191 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC104027.1-201ENST00000521887 300 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 MTCO1P47-201ENST00000523889 1271 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AP004247.1-201ENST00000531556 1289 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC093012.1-202ENST00000549403 582 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC090888.1-201ENST00000561335 1141 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 UBE2L4-201ENST00000587688 464 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 AL031281.1-201ENST00000604049 488 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC097468.3-201ENST00000607956 456 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC007038.2-201ENST00000608095 740 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC024933.1-201ENST00000608472 348 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AL158801.5-201ENST00000623123 465 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 CR392039.5-201ENST00000623201 510 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC034229.5-201ENST00000624258 185 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTP4A1Q93096 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTP4A1Q93096 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 Z83843.1-201ENST00000604070 3685 ntBASIC3.08□□□□□ -1.92
PTP4A1Q93096 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTP4A1Q93096 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PTP4A1Q93096 ZNF285B-201ENST00000561698 1767 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTP4A1Q93096 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTP4A1Q93096 AC092125.1-201ENST00000562568 1995 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PTP4A1Q93096 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.07□□□□□ -1.92
PTP4A1Q93096 SNORA72.3-201ENST00000365074 132 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTP4A1Q93096 RNU6-140P-201ENST00000384566 108 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 RPL21P24-201ENST00000413752 448 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 AL353678.1-201ENST00000422735 741 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 AC091390.3-201ENST00000426478 338 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.07□□□□□ -1.92
PTP4A1Q93096 AC018644.1-201ENST00000429934 551 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 AL117351.1-201ENST00000438864 766 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.07□□□□□ -1.92
PTP4A1Q93096 Z96811.1-201ENST00000445880 108 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.07□□□□□ -1.92
PTP4A1Q93096 AC013267.1-201ENST00000458227 267 ntBASIC3.07□□□□□ -1.92
PTP4A1Q93096 CENPBD1P1-201ENST00000464061 469 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms