Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 RN7SKP18-201ENST00000516005 275 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 RNU6-64P-201ENST00000517119 105 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 RNU6-1073P-201ENST00000517182 106 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 MIR3167-201ENST00000579623 85 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 MIR3922-201ENST00000585192 84 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC008277.2-201ENST00000605196 797 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AL031666.3-201ENST00000609320 1006 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AL161734.1-201ENST00000609720 557 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC103710.2-201ENST00000609912 942 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC006338.1-201ENST00000618453 749 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC138649.3-201ENST00000622154 254 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 C2orf27A-204ENST00000623058 969 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AL136313.1-201ENST00000624804 202 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 OR5AK4P-201ENST00000635912 903 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 USP8P1-201ENST00000494673 3183 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC011266.1-201ENST00000624119 3569 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 RNA5SP72-201ENST00000364442 117 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 RNA5SP189-201ENST00000364920 115 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 LAP3P1-201ENST00000403648 294 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 RNA5SP104-201ENST00000410989 118 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 RNA5SP39-201ENST00000411245 120 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 UBE2FP1-201ENST00000416536 447 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC024082.2-201ENST00000434771 238 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 HMGB1P37-201ENST00000439613 609 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AL353748.1-201ENST00000440753 474 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 MTND1P1-201ENST00000445453 368 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 MTCO3P20-201ENST00000454926 688 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 snoU13.4-201ENST00000458916 104 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC106707.2-201ENST00000484182 374 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC068305.1-201ENST00000497406 726 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC107401.1-201ENST00000503426 685 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC108078.1-201ENST00000508073 725 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 RNA5SP164-201ENST00000516533 110 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 SNORA31.22-201ENST00000517204 135 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 SNORA70.24-201ENST00000517233 118 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 IGKV2-23-201ENST00000518729 323 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC022616.3-201ENST00000523940 148 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC008489.1-201ENST00000524271 483 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 MIR5187-201ENST00000583479 76 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 MIR4293-201ENST00000584305 78 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 VN1R79P-201ENST00000593540 513 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AP000860.1-201ENST00000605250 559 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC012443.1-201ENST00000605605 231 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 AC004067.1-201ENST00000608733 700 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 U6.105-201ENST00000637379 88 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.85□□□□□ -1.79
HMGB4Q8WW32 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGB4Q8WW32 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AL353746.1-201ENST00000566293 6881 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 SNORA20.2-201ENST00000383922 131 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 RNU6-76P-201ENST00000384060 104 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 MIR491-201ENST00000384877 84 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 MIR183-201ENST00000384958 110 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 GSTA9P-201ENST00000406231 611 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 RNA5SP107-201ENST00000411358 122 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 ELOCP4-201ENST00000420090 333 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC137499.1-201ENST00000427602 88 ntBASIC3.84□□□□□ -1.79
HMGB4Q8WW32 AC133104.1-201ENST00000429100 218 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms