Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 IFNA20P-201ENST00000436840 528 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AL133547.1-201ENST00000448546 220 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 NANOGP10-201ENST00000453325 895 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 MTCO1P42-201ENST00000457379 726 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 RPS26P28-201ENST00000470806 348 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AL035404.1-201ENST00000497982 568 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AC112204.1-201ENST00000502591 103 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 RNU6-583P-201ENST00000516012 92 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 RNA5SP143-201ENST00000516936 115 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 RN7SKP283-201ENST00000517197 270 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AP003181.2-201ENST00000528941 181 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AC068587.4-201ENST00000533893 186 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 CYCSP30-201ENST00000546447 172 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 SUB1P2-201ENST00000556401 297 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AC004817.2-201ENST00000561794 651 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 MIR4742-201ENST00000581069 85 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AL080274.1-201ENST00000605565 220 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AP004247.3-201ENST00000608682 624 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AC087588.2-201ENST00000617667 426 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AC233309.1-201ENST00000619522 751 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 AC074029.4-201ENST00000624796 1859 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 MTND5P33-201ENST00000571250 1450 ntBASIC4.69□□□□□ -1.66
SH3RF3Q8TEJ3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 MTND4P35-201ENST00000604257 1375 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 RNU6-777P-201ENST00000364265 104 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 SNORA73.2-201ENST00000364946 201 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 Y_RNA.395-201ENST00000383945 109 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 U1.1-201ENST00000384101 164 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 RNU6-1158P-201ENST00000391167 107 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 ELOCP4-201ENST00000420090 333 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 SNRPEP4-201ENST00000435815 279 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC083863.1-201ENST00000438811 231 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 RPL17P49-201ENST00000443728 411 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 RANP8-201ENST00000444720 713 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 MTCO1P27-201ENST00000448269 226 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 TRGVB-201ENST00000453257 471 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 RPS20P21-201ENST00000466859 343 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 RN7SL283P-201ENST00000489055 303 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC023194.1-201ENST00000493084 308 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC025554.1-201ENST00000505641 188 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 POU5F1P7-201ENST00000508759 541 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 RNA5SP401-201ENST00000515920 127 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 Y_RNA.720-201ENST00000517166 92 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 PSMA2P1-201ENST00000526365 646 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC022882.1-201ENST00000532142 501 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 HMGB3P26-201ENST00000560051 582 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AP001180.3-201ENST00000582221 145 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AL109918.3-201ENST00000603072 338 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC115621.1-201ENST00000604653 858 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AC104237.2-201ENST00000612456 443 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AL773545.4-201ENST00000637262 310 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 AL513478.4-201ENST00000641636 310 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SH3RF3Q8TEJ3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 RPL7P26-201ENST00000333817 754 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 Y_RNA.31-201ENST00000362574 102 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 RNA5SP97-201ENST00000365006 84 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 RNU6-639P-201ENST00000384074 107 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 RNU6-769P-201ENST00000384407 104 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 SNORD116-29-201ENST00000384516 83 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 MT-TG-201ENST00000387429 68 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 MRPL50P2-201ENST00000416821 482 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 OR51AB1P-201ENST00000429046 620 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 LSM1P1-201ENST00000438629 273 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 HSPE1P28-201ENST00000443139 211 ntBASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.67□□□□□ -1.66
SH3RF3Q8TEJ3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms