Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 MIR335-201ENST00000362173 94 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 SNORD62.1-201ENST00000362541 86 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.277-201ENST00000364754 102 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 RNU6-128P-201ENST00000383976 107 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 RNU6-1127P-201ENST00000384580 107 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.576-201ENST00000384781 102 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 MIR192-201ENST00000384915 110 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AL034374.1-201ENST00000406329 351 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC114491.1-201ENST00000416095 246 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 HMGN2P27-201ENST00000427352 270 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 FTH1P1-201ENST00000437933 532 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC011753.3-201ENST00000443436 406 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 RPL21P89-201ENST00000444021 467 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC073264.2-201ENST00000448886 166 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 COX6B1P2-201ENST00000489624 230 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AP002812.1-201ENST00000495378 474 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 RNU6-1332P-201ENST00000516666 104 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 RNA5SP230-201ENST00000517039 122 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 RNU6-709P-201ENST00000517257 104 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC005868.1-201ENST00000536421 331 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AP006289.1-201ENST00000538089 277 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC009852.2-201ENST00000567898 485 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC060771.1-201ENST00000582031 164 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AL161423.1-201ENST00000613700 262 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AL138825.1-201ENST00000618587 192 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 AC138965.3-201ENST00000623875 498 ntBASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 AC027228.2-201ENST00000567141 2154 ntBASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
NEDD1Q8NHV4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC009313.2-201ENST00000417893 1941 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 Y_RNA.83-201ENST00000363005 113 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 RN7SKP115-201ENST00000363177 317 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 RNU6-179P-201ENST00000363350 107 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 SNORA23-201ENST00000365128 182 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 Y_RNA.352-201ENST00000365439 102 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 RNU6-61P-201ENST00000365528 109 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 RNU6-22P-201ENST00000384355 107 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 RNU2-50P-201ENST00000410494 143 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 COX6CP10-201ENST00000416832 224 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AL136097.1-201ENST00000456945 913 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC021205.1-201ENST00000468797 348 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC093267.1-201ENST00000489176 961 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC026979.1-201ENST00000492525 396 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC008897.1-201ENST00000494006 347 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC091868.1-201ENST00000508746 304 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 ENPP7P9-201ENST00000514456 627 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 RNA5SP228-201ENST00000516232 133 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 RNU6-307P-201ENST00000516743 106 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 COX6B1P6-201ENST00000522347 255 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AP000859.1-201ENST00000525536 307 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC011979.2-201ENST00000527568 352 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AP002392.1-201ENST00000537692 208 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC004024.1-201ENST00000549244 247 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC093249.4-201ENST00000564755 259 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 SNORD39.2-201ENST00000579995 76 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 RN7SL690P-201ENST00000582087 240 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC008162.1-201ENST00000604718 254 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AP001485.1-201ENST00000604799 199 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AL670379.4-201ENST00000605279 254 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 MIR6748-201ENST00000610433 71 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 MIR7973-1-201ENST00000614683 76 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AL159153.1-201ENST00000619688 317 ntBASIC5.64□□□□□ -1.51
NEDD1Q8NHV4 AC073869.10-201ENST00000642016 354 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms