Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AL049839.1-201ENST00000556151 657 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AC113195.1-201ENST00000579952 141 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 PRR13P7-201ENST00000605538 430 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 MIR6820-201ENST00000611508 62 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AL049539.1-201ENST00000611964 459 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AL022401.1-201ENST00000619498 108 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AP002799.1-201ENST00000623552 423 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 MTCO1P24-201ENST00000515438 1558 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 RNU4-44P-201ENST00000363050 141 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 RN7SKP103-201ENST00000363848 320 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 RNU6-715P-201ENST00000365204 103 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.455-201ENST00000384230 98 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.574-201ENST00000384766 95 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC092447.6-201ENST00000414578 210 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 CKS1BP6-201ENST00000424932 240 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC093151.1-201ENST00000427711 313 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 RPL23AP69-201ENST00000431134 458 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC236972.1-201ENST00000433225 199 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 CECR9-201ENST00000453421 199 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC110794.1-201ENST00000505816 425 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 RNU6-470P-201ENST00000515954 104 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 RNU6-1332P-201ENST00000516666 104 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC023442.1-201ENST00000531247 422 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 RN7SL435P-201ENST00000584418 282 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC104695.3-201ENST00000604052 296 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC110801.1-201ENST00000623590 212 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AL450326.2-201ENST00000421913 1962 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 AC027287.1-201ENST00000553115 1453 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 CDC27P3-201ENST00000635418 1910 ntBASIC4.54□□□□□ -1.68
NUP43Q8NFH3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUP43Q8NFH3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 PHKBP1-201ENST00000450951 1951 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RN7SKP95-201ENST00000362860 303 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RNU6-490P-201ENST00000362985 107 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 SNORA63.7-201ENST00000365579 123 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RNU6-701P-201ENST00000384059 107 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RNU6-434P-201ENST00000384376 107 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RNU6-146P-201ENST00000384602 108 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RNU6-95P-201ENST00000384697 107 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 NDUFS5P1-201ENST00000405668 289 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RPS23P10-201ENST00000416185 486 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RPL21P109-201ENST00000422213 475 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 Z98949.2-201ENST00000440996 144 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 CEACAMP7-201ENST00000444105 496 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 FABP5P13-201ENST00000452144 328 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 snoU13.20-201ENST00000459180 104 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 U8.20-201ENST00000459445 131 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RPL23AP56-201ENST00000460778 453 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RPL5P30-201ENST00000465511 891 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AC010655.3-201ENST00000478818 450 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 CEACAMP10-202ENST00000495431 496 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RN7SL808P-201ENST00000496066 299 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RN7SL558P-201ENST00000497468 299 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 HIGD1AP3-201ENST00000515857 278 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 RNA5SP392-201ENST00000516905 112 ntBASIC4.53□□□□□ -1.68
NUP43Q8NFH3 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.53□□□□□ -1.68
NUP43Q8NFH3 AC006254.3-201ENST00000603353 884 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms