Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 GPR143P-201ENST00000434155 205 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 NFU1P2-201ENST00000448700 469 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 RPS17P13-201ENST00000448974 407 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 RPS11P1-201ENST00000451072 473 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 AC022364.2-201ENST00000457963 554 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 RNU7-59P-201ENST00000459101 61 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 RNU6-798P-201ENST00000516912 103 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 HMGN1P28-201ENST00000521340 364 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 AC011979.2-201ENST00000527568 352 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 AC118273.2-201ENST00000532092 465 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 MIR1321-201ENST00000637766 79 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 NMD3P1-201ENST00000439704 1488 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 EOGT-210ENST00000615922 1931 ntBASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMC1BQ8NDV3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 MIR448-201ENST00000362131 111 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 RNU6-867P-201ENST00000364956 107 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 RNY3P13-201ENST00000365542 102 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 USP9YP6-201ENST00000413550 854 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 MTATP6P18-201ENST00000417994 673 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 MTCO3P18-201ENST00000440206 761 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 TPT1P14-201ENST00000448018 505 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AL121877.1-201ENST00000453704 622 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC234775.1-201ENST00000454247 670 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 VWA8P1-201ENST00000510889 176 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC021146.1-201ENST00000511202 716 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 Y_RNA.704-201ENST00000516851 102 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AK6P1-201ENST00000540219 478 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC104984.5-201ENST00000586878 94 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC245517.5-201ENST00000611529 162 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 MIR8058-201ENST00000615737 89 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC002553.4-201ENST00000616896 331 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC243312.2-201ENST00000623340 601 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC009161.2-201ENST00000624626 138 ntBASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMC1BQ8NDV3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 RNU6-1097P-201ENST00000363586 107 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 RNU6-1090P-201ENST00000364065 94 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 RNU6-108P-201ENST00000365558 107 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 RNY3P14-201ENST00000384309 102 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 RPL35AP22-201ENST00000436855 335 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AL662791.1-201ENST00000441992 928 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC079781.2-201ENST00000446424 169 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 RPL21P23-201ENST00000446654 460 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC103783.1-201ENST00000520506 373 ntBASIC4.77□□□□□ -1.65
SMC1BQ8NDV3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms