Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNU6-193P-201ENST00000410977 107 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 HMGB1P11-201ENST00000413899 637 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 Z99755.1-201ENST00000414048 380 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC017079.2-201ENST00000416102 485 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 USP9YP26-201ENST00000421008 661 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AL022400.1-201ENST00000423946 935 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 ISCA1P2-201ENST00000438679 421 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 RPS27P29-201ENST00000463110 252 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 AL160314.1-201ENST00000490836 438 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC118282.1-201ENST00000506408 765 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 SNORA31.26-201ENST00000517250 137 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC087276.1-201ENST00000529659 480 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC013828.2-201ENST00000532487 235 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC093012.1-202ENST00000549403 582 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 AL354943.1-201ENST00000572103 781 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC006504.3-201ENST00000586818 523 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC010620.2-201ENST00000600135 313 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC006539.2-201ENST00000601729 572 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC025588.2-201ENST00000604851 466 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC107952.2-201ENST00000606048 486 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC103710.1-201ENST00000610003 901 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC091965.5-201ENST00000624785 342 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC068724.3-201ENST00000625906 87 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 AC073476.4-201ENST00000628409 72 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 Z83843.1-201ENST00000604070 3685 ntBASIC3.53□□□□□ -1.84
CCDC89Q8N998 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC89Q8N998 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC89Q8N998 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC89Q8N998 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CCDC89Q8N998 AC138915.1-201ENST00000565427 1685 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC89Q8N998 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 RNU6-253P-201ENST00000384730 105 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 RPL17P12-201ENST00000413391 526 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC89Q8N998 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 FTH1P1-201ENST00000437933 532 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 RPS26P21-201ENST00000475397 348 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC89Q8N998 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC89Q8N998 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 SNORA64.4-201ENST00000516632 81 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 RNU6-56P-201ENST00000516986 93 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 AC104027.1-201ENST00000521887 300 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 MTCO1P47-201ENST00000523889 1271 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 AGGF1P5-201ENST00000567900 919 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 AC010653.1-201ENST00000571108 881 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 VN1R85P-201ENST00000601587 426 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 AC136601.2-201ENST00000604356 474 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 AC105148.1-201ENST00000604961 409 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 FTX_3.1-201ENST00000610451 147 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 AL050303.3-201ENST00000613704 284 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 AC002064.3-201ENST00000623448 346 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 PABPC1P9-201ENST00000426076 1612 ntBASIC3.52□□□□□ -1.85
CCDC89Q8N998 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC89Q8N998 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC89Q8N998 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC89Q8N998 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CCDC89Q8N998 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC89Q8N998 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC89Q8N998 FTLP6-201ENST00000355274 422 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 RNU4-28P-201ENST00000364739 141 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 AL359837.1-201ENST00000381357 287 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CCDC89Q8N998 Y_RNA.625-201ENST00000411256 107 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC89Q8N998 RPS24P7-201ENST00000416921 246 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 RPL22P18-201ENST00000417197 377 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC89Q8N998 AC009414.1-201ENST00000427200 443 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC89Q8N998 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC89Q8N998 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC89Q8N998 NOTCH2P1-201ENST00000443481 624 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 MTCYBP3-201ENST00000445588 1137 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 Z96811.1-201ENST00000445880 108 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 AC073387.1-201ENST00000453261 709 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC89Q8N998 AC010631.1-201ENST00000474150 156 ntBASIC3.51□□□□□ -1.85
CCDC89Q8N998 AC092185.1-201ENST00000491371 97 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms