Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL357078.3-201ENST00000607528 618 ntBASIC4.59□□□□□ -1.67
SYNPOQ8N3V7 AC012409.4-201ENST00000612923 249 ntBASIC4.59□□□□□ -1.67
SYNPOQ8N3V7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNPOQ8N3V7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.59□□□□□ -1.67
SYNPOQ8N3V7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
SYNPOQ8N3V7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
SYNPOQ8N3V7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SYNPOQ8N3V7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SYNPOQ8N3V7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SYNPOQ8N3V7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
SYNPOQ8N3V7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
SYNPOQ8N3V7 AC107068.1-201ENST00000563286 4218 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 RNU6-50P-201ENST00000362356 103 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 RNU1-83P-201ENST00000363426 164 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 RPL21P8-201ENST00000465083 535 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 RPL31P60-201ENST00000478450 367 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 MTCYBP18-201ENST00000501056 747 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 Y_RNA.702-201ENST00000516843 96 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 OR5D17P-201ENST00000531492 978 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC087477.6-201ENST00000559595 843 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AL035413.2-201ENST00000604801 525 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC113403.1-201ENST00000604910 193 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC092794.2-201ENST00000620933 563 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC008785.1-201ENST00000624475 456 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AL592182.3-201ENST00000642132 3304 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 OR51H2P-202ENST00000641424 3046 ntBASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SYNPOQ8N3V7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 RNU1-13P-201ENST00000384499 162 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 RNU6-332P-201ENST00000391193 108 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 CISD1P1-201ENST00000393907 327 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 SNORA11F-201ENST00000408237 128 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 RNA5SP129-201ENST00000410276 118 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 RNA5SP118-201ENST00000410385 109 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 RNU6-387P-201ENST00000411331 105 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 AL451054.2-201ENST00000420896 202 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 RPL27AP8-201ENST00000424277 446 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 AL591212.2-201ENST00000433923 257 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 AC004938.1-201ENST00000438468 308 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 RPS26P2-201ENST00000440331 348 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 TXNP1-201ENST00000441872 371 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 MTND3P16-201ENST00000452205 344 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 RNU6-1256P-201ENST00000516539 103 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 SNORA20.3-201ENST00000516880 132 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 MIR3921-201ENST00000577308 85 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 RN7SL176P-201ENST00000580352 264 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 SNORD91B-202ENST00000608459 222 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 AL365204.3-201ENST00000612448 685 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 LINC00901.1-201ENST00000617252 152 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 uc_338.11-201ENST00000619132 160 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 AL137003.2-201ENST00000606924 2538 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 AC004972.1-201ENST00000623934 2209 ntBASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNPOQ8N3V7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms