Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL670379.8-201ENST00000605353 252 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.9-201ENST00000605428 253 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AC008962.1-201ENST00000605729 304 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.7-201ENST00000605823 252 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 OR1S1-201ENST00000624470 978 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS8Q8N3P4 NUP58P1-201ENST00000502546 1738 ntBASIC2.33□□□□□ -2.04
VPS8Q8N3P4 Y_RNA.164-201ENST00000363709 102 ntBASIC2.33□□□□□ -2.04
VPS8Q8N3P4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS8Q8N3P4 AC110792.2-201ENST00000510278 224 ntBASIC2.33□□□□□ -2.04
VPS8Q8N3P4 AC117532.1-201ENST00000514638 323 ntBASIC2.33□□□□□ -2.04
VPS8Q8N3P4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS8Q8N3P4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS8Q8N3P4 OSBPL9P3-201ENST00000534523 595 ntBASIC2.33□□□□□ -2.04
VPS8Q8N3P4 SUB1P3-201ENST00000564581 315 ntBASIC2.33□□□□□ -2.04
VPS8Q8N3P4 MIR4781-201ENST00000585250 76 ntBASIC2.33□□□□□ -2.04
VPS8Q8N3P4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS8Q8N3P4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS8Q8N3P4 SNORA67.6-201ENST00000391093 99 ntBASIC2.32□□□□□ -2.04
VPS8Q8N3P4 AC009237.2-201ENST00000421358 284 ntBASIC2.32□□□□□ -2.04
VPS8Q8N3P4 AL445669.1-201ENST00000426743 755 ntBASIC2.32□□□□□ -2.04
VPS8Q8N3P4 AL354695.1-201ENST00000427935 228 ntBASIC2.32□□□□□ -2.04
VPS8Q8N3P4 HMGB1P27-201ENST00000431429 603 ntBASIC2.32□□□□□ -2.04
VPS8Q8N3P4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS8Q8N3P4 OR10R1P-201ENST00000441524 1141 ntBASIC2.32□□□□□ -2.04
VPS8Q8N3P4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS8Q8N3P4 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS8Q8N3P4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS8Q8N3P4 NOP56P3-201ENST00000549457 385 ntBASIC2.32□□□□□ -2.04
VPS8Q8N3P4 AC116618.1-201ENST00000634617 774 ntBASIC2.32□□□□□ -2.04
VPS8Q8N3P4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VPS8Q8N3P4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS8Q8N3P4 WWP1P1-201ENST00000466609 2769 ntBASIC2.31□□□□□ -2.04
VPS8Q8N3P4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS8Q8N3P4 PABPC1P7-201ENST00000413177 1513 ntBASIC2.31□□□□□ -2.04
VPS8Q8N3P4 RNU6-1181P-201ENST00000384191 106 ntBASIC2.31□□□□□ -2.04
VPS8Q8N3P4 FGF7P8-201ENST00000402994 292 ntBASIC2.31□□□□□ -2.04
VPS8Q8N3P4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.31□□□□□ -2.04
VPS8Q8N3P4 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.31□□□□□ -2.04
VPS8Q8N3P4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS8Q8N3P4 HMGB1P38-201ENST00000490557 577 ntBASIC2.31□□□□□ -2.04
VPS8Q8N3P4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS8Q8N3P4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS8Q8N3P4 AC106791.2-201ENST00000604680 391 ntBASIC2.31□□□□□ -2.04
VPS8Q8N3P4 MIR8070-201ENST00000616510 88 ntBASIC2.31□□□□□ -2.04
VPS8Q8N3P4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS8Q8N3P4 SNORA67.1-201ENST00000364749 141 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 ANAPC10P1-201ENST00000395991 556 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS8Q8N3P4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS8Q8N3P4 AL513343.1-201ENST00000451818 792 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 BX322784.1-201ENST00000455793 1077 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 SNORD121B-201ENST00000458838 81 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 AC005840.1-201ENST00000498412 377 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS8Q8N3P4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 AC008083.2-201ENST00000546707 476 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 AL161670.1-201ENST00000554348 137 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 AC112503.2-201ENST00000609005 552 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 AC010872.1-201ENST00000624225 675 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 MIR4496-201ENST00000635896 61 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 BX649567.1-201ENST00000642071 1134 ntBASIC2.3□□□□□ -2.04
VPS8Q8N3P4 MAPK10-266ENST00000641066 6555 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 AC080128.1-201ENST00000474389 1917 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 RPS15AP12-201ENST00000419498 388 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 AC233728.2-201ENST00000425348 757 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 AC090774.1-201ENST00000435925 246 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 RPS15AP36-201ENST00000492022 382 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 AC108078.2-201ENST00000510750 236 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 AC087808.1-201ENST00000520501 361 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 AP004607.1-201ENST00000524456 203 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 MIR3122-201ENST00000577243 73 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 AC010928.2-201ENST00000588017 287 ntBASIC2.29□□□□□ -2.04
VPS8Q8N3P4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
VPS8Q8N3P4 RNU6-335P-201ENST00000364563 113 ntBASIC2.28□□□□□ -2.04
VPS8Q8N3P4 HMGN2P30-201ENST00000423237 256 ntBASIC2.28□□□□□ -2.04
VPS8Q8N3P4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS8Q8N3P4 ARPC3P1-201ENST00000437218 533 ntBASIC2.28□□□□□ -2.04
VPS8Q8N3P4 CALM1P2-201ENST00000452941 448 ntBASIC2.28□□□□□ -2.04
VPS8Q8N3P4 AC234775.1-201ENST00000454247 670 ntBASIC2.28□□□□□ -2.04
VPS8Q8N3P4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS8Q8N3P4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS8Q8N3P4 AC109635.4-202ENST00000531666 412 ntBASIC2.28□□□□□ -2.04
VPS8Q8N3P4 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS8Q8N3P4 AC010546.1-201ENST00000569391 485 ntBASIC2.28□□□□□ -2.04
VPS8Q8N3P4 AC084373.1-201ENST00000603311 235 ntBASIC2.28□□□□□ -2.04
VPS8Q8N3P4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
VPS8Q8N3P4 RNU2-40P-201ENST00000410833 196 ntBASIC2.27□□□□□ -2.05
VPS8Q8N3P4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS8Q8N3P4 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.27□□□□□ -2.05
VPS8Q8N3P4 AL512661.1-201ENST00000434586 1253 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms