Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.45□□□□□ -1.86
SHFQ7M4L6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
SHFQ7M4L6 AL365440.1-201ENST00000436135 2167 ntBASIC3.45□□□□□ -1.86
SHFQ7M4L6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHFQ7M4L6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
SHFQ7M4L6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SHFQ7M4L6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
SHFQ7M4L6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 Y_RNA.159-201ENST00000363674 87 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 RNU6-278P-201ENST00000390945 109 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AL109755.1-201ENST00000401791 649 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 RNU4-65P-201ENST00000410473 140 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 RNU4-6P-201ENST00000410804 122 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC002486.1-201ENST00000435098 391 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC090774.1-201ENST00000435925 246 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 Z99127.3-201ENST00000448158 395 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 SNRPGP5-201ENST00000456003 220 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 RPS15AP36-201ENST00000492022 382 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC078817.1-201ENST00000492623 435 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC019235.1-201ENST00000503847 207 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC090572.1-201ENST00000519251 160 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 AP001893.2-201ENST00000526949 202 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AP003072.2-201ENST00000527756 676 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 RN7SL600P-201ENST00000581811 299 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 MIR4293-201ENST00000584305 78 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC010928.3-201ENST00000587712 541 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AL022099.1-201ENST00000604551 712 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AC008277.2-201ENST00000605196 797 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 ARF4P1-201ENST00000605447 541 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 AL445567.2-201ENST00000618935 498 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.44□□□□□ -1.86
SHFQ7M4L6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHFQ7M4L6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.44□□□□□ -1.86
SHFQ7M4L6 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 CR848007.1-201ENST00000442354 1699 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHFQ7M4L6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 RNU6-511P-201ENST00000363496 107 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RNA5SP97-201ENST00000365006 84 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 Y_RNA.372-201ENST00000365599 102 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 Y_RNA.409-201ENST00000383990 98 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RNU6-39P-201ENST00000384344 107 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RNU6-328P-201ENST00000390887 106 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RNU6-780P-201ENST00000391030 104 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHFQ7M4L6 AL590704.1-201ENST00000402856 794 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RNA5SP107-201ENST00000411358 122 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 UBE2FP1-201ENST00000416536 447 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 MTCO3P12-201ENST00000416718 547 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 MTCYBP5-201ENST00000423752 1135 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 USP9YP18-201ENST00000425912 695 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AL691449.1-201ENST00000426570 421 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC137499.1-201ENST00000427602 88 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC004866.2-201ENST00000438285 481 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 NUTF2P3-201ENST00000448540 384 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC010285.1-201ENST00000470580 392 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC084198.1-201ENST00000477747 402 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RPS23P1-201ENST00000491662 432 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC110792.1-201ENST00000491826 472 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 AC023194.1-201ENST00000493084 308 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 ARL4AP2-201ENST00000507378 601 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.43□□□□□ -1.86
SHFQ7M4L6 RAC1P2-201ENST00000511164 579 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 ARL2BPP6-201ENST00000512757 439 ntBASIC3.43□□□□□ -1.86
SHFQ7M4L6 RNU6-718P-201ENST00000516166 105 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms