Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.17□□□□□ -2.06
USP54Q70EL1 AL513343.1-201ENST00000451818 792 ntBASIC2.17□□□□□ -2.06
USP54Q70EL1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.17□□□□□ -2.06
USP54Q70EL1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.17□□□□□ -2.06
USP54Q70EL1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.17□□□□□ -2.06
USP54Q70EL1 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.17□□□□□ -2.06
USP54Q70EL1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.17□□□□□ -2.06
USP54Q70EL1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.17□□□□□ -2.06
USP54Q70EL1 MIR3935-201ENST00000583472 104 ntBASIC2.17□□□□□ -2.06
USP54Q70EL1 AC009220.3-201ENST00000604318 586 ntBASIC2.17□□□□□ -2.06
USP54Q70EL1 AC005021.1-201ENST00000608730 355 ntBASIC2.17□□□□□ -2.06
USP54Q70EL1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.17□□□□□ -2.06
USP54Q70EL1 FAM157B-203ENST00000639350 358 ntBASIC2.17□□□□□ -2.06
USP54Q70EL1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
USP54Q70EL1 RNU6-600P-201ENST00000362524 99 ntBASIC2.16□□□□□ -2.06
USP54Q70EL1 AL138880.1-201ENST00000405824 642 ntBASIC2.16□□□□□ -2.06
USP54Q70EL1 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.16□□□□□ -2.06
USP54Q70EL1 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.16□□□□□ -2.06
USP54Q70EL1 AL035407.2-201ENST00000454090 378 ntBASIC2.16□□□□□ -2.06
USP54Q70EL1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.16□□□□□ -2.06
USP54Q70EL1 RPS15AP1-201ENST00000457423 391 ntBASIC2.16□□□□□ -2.06
USP54Q70EL1 NF1P3-201ENST00000457709 450 ntBASIC2.16□□□□□ -2.06
USP54Q70EL1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.16□□□□□ -2.06
USP54Q70EL1 RNA5SP468-201ENST00000516782 93 ntBASIC2.16□□□□□ -2.06
USP54Q70EL1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.16□□□□□ -2.06
USP54Q70EL1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.16□□□□□ -2.06
USP54Q70EL1 ACTR3BP3-201ENST00000565577 979 ntBASIC2.16□□□□□ -2.06
USP54Q70EL1 MYL12BP1-201ENST00000569826 507 ntBASIC2.16□□□□□ -2.06
USP54Q70EL1 SNORA4-201ENST00000584302 138 ntBASIC2.16□□□□□ -2.06
USP54Q70EL1 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.16□□□□□ -2.06
USP54Q70EL1 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USP54Q70EL1 AL391987.6-201ENST00000305671 199 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 RNA5SP393-201ENST00000363423 117 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 MCTS2P-201ENST00000394552 546 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.15□□□□□ -2.06
USP54Q70EL1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.15□□□□□ -2.06
USP54Q70EL1 AC021087.2-201ENST00000504656 1203 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.15□□□□□ -2.06
USP54Q70EL1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.15□□□□□ -2.06
USP54Q70EL1 AC109464.2-201ENST00000510242 943 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.15□□□□□ -2.06
USP54Q70EL1 AC109635.4-202ENST00000531666 412 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 MIR3618-201ENST00000580330 88 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 AC090616.5-202ENST00000582111 297 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 AC098848.2-201ENST00000588023 330 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 AC113194.1-201ENST00000606037 500 ntBASIC2.15□□□□□ -2.06
USP54Q70EL1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
USP54Q70EL1 MTND5P35-201ENST00000557537 1720 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.15□□□□□ -2.07
USP54Q70EL1 RNA5SP489-201ENST00000410986 109 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.15□□□□□ -2.07
USP54Q70EL1 USP9YP6-201ENST00000413550 854 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 AC004022.2-201ENST00000413824 193 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.15□□□□□ -2.07
USP54Q70EL1 AC241520.1-201ENST00000422654 1099 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 AC114973.1-201ENST00000429057 632 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.15□□□□□ -2.07
USP54Q70EL1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.15□□□□□ -2.07
USP54Q70EL1 ARPC3P1-201ENST00000437218 533 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 RPL23AP16-201ENST00000441715 421 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 RPL31P20-201ENST00000449593 360 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 Z99714.1-201ENST00000450463 807 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 SSXP4-201ENST00000451349 245 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 USP9YP34-201ENST00000453983 808 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.15□□□□□ -2.07
USP54Q70EL1 RPL23AP55-201ENST00000498163 452 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 RPL37P25-201ENST00000507308 276 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 RN7SKP40-201ENST00000517211 242 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 NOP56P3-201ENST00000549457 385 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.15□□□□□ -2.07
USP54Q70EL1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
USP54Q70EL1 AP001029.3-201ENST00000588063 596 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 AL512598.1-201ENST00000610158 273 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 RMST_6.1-201ENST00000611980 203 ntBASIC2.15□□□□□ -2.07
USP54Q70EL1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.14□□□□□ -2.07
USP54Q70EL1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.14□□□□□ -2.07
USP54Q70EL1 HSPE1P11-201ENST00000339579 310 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 RNU4-65P-201ENST00000410473 140 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 POLHP1-201ENST00000411806 470 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.14□□□□□ -2.07
USP54Q70EL1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.14□□□□□ -2.07
USP54Q70EL1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.14□□□□□ -2.07
USP54Q70EL1 RPL21P66-201ENST00000426566 466 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 FO393414.1-201ENST00000428697 1184 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.14□□□□□ -2.07
USP54Q70EL1 HMGN2P16-201ENST00000456802 261 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.14□□□□□ -2.07
USP54Q70EL1 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.14□□□□□ -2.07
USP54Q70EL1 AC135721.1-201ENST00000497954 479 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.14□□□□□ -2.07
USP54Q70EL1 AC110792.2-201ENST00000510278 224 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.14□□□□□ -2.07
USP54Q70EL1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.14□□□□□ -2.07
USP54Q70EL1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.14□□□□□ -2.07
USP54Q70EL1 MIR4421-201ENST00000578133 69 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.14□□□□□ -2.07
USP54Q70EL1 MTCO2P22-201ENST00000603246 681 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 AL590410.1-201ENST00000617925 333 ntBASIC2.14□□□□□ -2.07
USP54Q70EL1 AP001350.1-201ENST00000601906 1524 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms