Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNA5SP44-201ENST00000410446 133 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 UBE2FP1-201ENST00000416536 447 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 USP12PX-201ENST00000432383 1057 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AL117351.1-201ENST00000438864 766 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 ATG12P2-201ENST00000456830 416 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 MTND4LP3-201ENST00000468320 276 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC114967.1-201ENST00000504890 259 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 HMGN1P11-201ENST00000508668 303 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 MIR2276-201ENST00000516886 89 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC026403.1-201ENST00000518938 295 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC103843.2-201ENST00000530523 682 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC007954.1-201ENST00000554198 494 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AL845331.3-202ENST00000562856 261 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 MIR544B-201ENST00000582372 78 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 TPMTP1-201ENST00000592307 737 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AL139344.1-201ENST00000605228 195 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC004852.3-201ENST00000614131 326 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AC009159.2-201ENST00000617603 606 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 AL049781.1-201ENST00000623195 3585 ntBASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NHLRC1Q6VVB1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AC007785.2-201ENST00000598627 1916 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 RNU6-799P-201ENST00000363567 107 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 SNORD17-201ENST00000390930 237 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AC110754.1-201ENST00000399740 601 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 HSPE1P1-201ENST00000421494 318 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 RPL23AP82-202ENST00000427528 469 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AL512844.2-201ENST00000433990 593 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 MTCYBP3-201ENST00000445588 1137 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 MTATP6P26-201ENST00000445926 662 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AC108059.3-201ENST00000456388 214 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 RPL37P6-201ENST00000460682 294 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 SETP11-201ENST00000473027 690 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AP000563.1-201ENST00000490865 758 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 CASP1P1-201ENST00000526345 212 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AP000907.2-201ENST00000530827 353 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AP000857.1-201ENST00000532151 543 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 OR4T1P-201ENST00000554933 911 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 MIR4444-1-201ENST00000581696 74 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 MIR4444-2-201ENST00000584390 74 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 MIR3922-201ENST00000585192 84 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 GLUD1P4-201ENST00000590914 418 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AL451064.1-201ENST00000607718 471 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AC007038.2-201ENST00000608095 740 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AC079395.3-201ENST00000615161 484 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AL161629.2-201ENST00000615347 275 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AC010133.1-201ENST00000615809 842 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 AC073308.1-201ENST00000623696 305 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 SNORA50A-202ENST00000629536 136 ntBASIC3.09□□□□□ -1.91
NHLRC1Q6VVB1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.09□□□□□ -1.92
NHLRC1Q6VVB1 AL049641.1-201ENST00000441055 1948 ntBASIC3.09□□□□□ -1.92
NHLRC1Q6VVB1 ZNF826P-207ENST00000622273 1910 ntBASIC3.09□□□□□ -1.92
NHLRC1Q6VVB1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AC006378.2-201ENST00000623178 2476 ntBASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NHLRC1Q6VVB1 AL391994.1-201ENST00000254724 282 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms