Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 AC012493.3-201ENST00000604494 112 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 AC009570.1-201ENST00000609599 745 ntBASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CCDC171Q6TFL3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 RNA5SP310-201ENST00000459084 116 ntBASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 RPS20P22-201ENST00000473700 357 ntBASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 AC015908.1-201ENST00000478739 476 ntBASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 RPL30P14-201ENST00000482744 348 ntBASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 AC107393.1-201ENST00000512403 346 ntBASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 AC011460.1-201ENST00000636268 1834 ntBASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 AC009902.3-201ENST00000606235 2172 ntBASIC2.18□□□□□ -2.06
CCDC171Q6TFL3 RNA5SP99-201ENST00000364020 114 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 HMGN2P19-201ENST00000425149 265 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 MTCYBP45-201ENST00000435243 565 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 GPM6BP3-201ENST00000442797 145 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 HMGB1P48-201ENST00000446155 598 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 BUD31P2-201ENST00000449374 300 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AP001960.1-201ENST00000506494 658 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC108120.2-201ENST00000512973 294 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 MTCO1P40-201ENST00000574371 625 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC092474.3-201ENST00000603022 568 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 KATNBL1P1-201ENST00000605192 748 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 HSPA8P4-201ENST00000511877 1920 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 MTND4P31-201ENST00000425607 1343 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 RNU6-837P-201ENST00000391056 108 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 MIR1294-201ENST00000408503 142 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 USP9YP15-201ENST00000442391 422 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC007677.1-201ENST00000445757 515 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 SETP11-201ENST00000473027 690 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 FAM92A1P2-202ENST00000504766 877 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC016065.2-201ENST00000514530 444 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 OR10V3P-201ENST00000525712 725 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 HSPE1P3-201ENST00000559254 309 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC107954.1-201ENST00000565906 727 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 AP004247.3-201ENST00000608682 624 ntBASIC2.17□□□□□ -2.06
CCDC171Q6TFL3 MTND5P28-201ENST00000438005 1594 ntBASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 PSPHP1-201ENST00000450062 261 ntBASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 AC233279.1-201ENST00000455300 423 ntBASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 AC078857.1-201ENST00000469870 667 ntBASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 AC090453.1-201ENST00000495560 436 ntBASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 AL353997.5-201ENST00000618886 171 ntBASIC2.16□□□□□ -2.06
CCDC171Q6TFL3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.15□□□□□ -2.06
CCDC171Q6TFL3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 SNORA46.1-201ENST00000391069 153 ntBASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 SNORA40.18-201ENST00000391200 128 ntBASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 AL513321.1-201ENST00000441175 761 ntBASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 HMGB1P1-201ENST00000522557 636 ntBASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 AC126177.3-201ENST00000551839 688 ntBASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 MIR4419B-201ENST00000577260 68 ntBASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 BNIP3P10-201ENST00000605360 577 ntBASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC171Q6TFL3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC171Q6TFL3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms