Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ZNF90P2-204ENST00000419323 1075 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 UQCRBP1-201ENST00000421129 336 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 HMGB3P12-201ENST00000438745 556 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 RPL23AP93-201ENST00000440847 484 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AC023598.1-201ENST00000472521 361 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AC041039.1-201ENST00000485656 536 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 CEACAMP10-202ENST00000495431 496 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-927P-201ENST00000516199 100 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 RNU2-10P-201ENST00000516375 211 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 MIR2114-201ENST00000516645 80 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-1282P-201ENST00000516735 96 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 RPS3AP4-201ENST00000555161 764 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AC105129.1-201ENST00000560250 297 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 TPRKBP2-201ENST00000565969 475 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 HSPE1P7-201ENST00000604681 321 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AF250324.2-201ENST00000608299 610 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AC092954.2-201ENST00000609103 430 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 MIR6780A-201ENST00000615089 68 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 ZNF962P-201ENST00000443465 3140 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 AC125257.1-201ENST00000560400 2930 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC079741.1-201ENST00000321498 212 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-188P-201ENST00000364207 107 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-108P-201ENST00000365558 107 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-74P-201ENST00000384235 107 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 MIR558-201ENST00000384920 94 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-1077P-201ENST00000410506 102 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 UBE2V1P10-201ENST00000414685 269 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 RPL23AP69-201ENST00000431134 458 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 MTND1P4-201ENST00000435196 415 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AL162591.2-201ENST00000449634 317 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 snoU13.1-201ENST00000459157 104 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 RPL21P126-201ENST00000470049 478 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AL135752.1-201ENST00000479477 471 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 RPL30P14-201ENST00000482744 348 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 VN1R105P-201ENST00000486595 910 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 SNORA31.3-201ENST00000516029 96 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 HMGB1P41-201ENST00000520234 440 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 TRAV28-201ENST00000557548 323 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC002545.1-201ENST00000592511 181 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AL121992.2-201ENST00000606262 256 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AL592295.2-201ENST00000612578 206 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AL138880.2-201ENST00000616214 239 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AP005019.3-201ENST00000620418 560 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC068792.1-201ENST00000621354 417 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 AC124864.2-201ENST00000624736 186 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 MTND1P37-201ENST00000636562 264 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 OR5H6-203ENST00000642105 978 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 TPTE2P4-201ENST00000258589 1605 ntBASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PPP4R4Q6NUP7 CPHL1P-201ENST00000461341 3407 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AC007656.2-201ENST00000624902 4547 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 SMIM11P1-201ENST00000369586 178 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 PTMAP5-201ENST00000393073 333 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 CALM2P3-201ENST00000400429 449 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AL139397.2-201ENST00000404529 772 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 RNU2-33P-201ENST00000410344 192 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms