Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TRBV26-201ENST00000456572 344 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 CYCSP34-201ENST00000458172 304 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 RPS17P2-201ENST00000461663 408 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 RPS23P3-201ENST00000470993 430 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 RN7SL817P-201ENST00000480777 288 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 RN7SL244P-201ENST00000493405 297 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 AC140172.1-201ENST00000502928 141 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 RN7SKP96-201ENST00000516948 297 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 RNU6-111P-201ENST00000517179 105 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 HSPE1P20-201ENST00000538133 289 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 AC022080.3-201ENST00000544433 482 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 SNORD91B-202ENST00000608459 222 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 FTX_2.1-201ENST00000618816 94 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 AL445363.3-201ENST00000623080 671 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 AC091903.1-201ENST00000624322 454 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 CYP3A51P-201ENST00000633513 256 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF43Q68DV7 AP001273.1-201ENST00000624493 3152 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 AC093775.1-201ENST00000624154 1868 ntBASIC5.17□□□□□ -1.58
RNF43Q68DV7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF43Q68DV7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF43Q68DV7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF43Q68DV7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC107081.3-201ENST00000612715 2034 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF43Q68DV7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC063976.2-201ENST00000425667 3556 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF43Q68DV7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 RNU6-61P-201ENST00000365528 109 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 SNORD14.1-201ENST00000365609 90 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 RNU6-187P-201ENST00000384139 106 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 RNU6-432P-201ENST00000384196 109 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 SNORA24.1-201ENST00000384401 135 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 RNU4-46P-201ENST00000410818 138 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 RPL36P19-201ENST00000430744 301 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC093414.1-201ENST00000434712 514 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 AL121871.1-201ENST00000443413 436 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC073910.1-201ENST00000445047 438 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 RAC1P7-201ENST00000445367 377 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 RPS15AP27-201ENST00000449183 343 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC005008.1-201ENST00000456151 612 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 MED28P2-201ENST00000475771 317 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 RNA5SP249-201ENST00000516127 99 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 IGKV2D-23-201ENST00000518179 286 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC136624.4-201ENST00000573044 370 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC090615.1-201ENST00000577519 154 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 COX6CP3-201ENST00000580869 223 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF43Q68DV7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF43Q68DV7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 MTND5P6-201ENST00000422338 1798 ntBASIC5.16□□□□□ -1.58
RNF43Q68DV7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF43Q68DV7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF43Q68DV7 TPTE2P4-201ENST00000258589 1605 ntBASIC5.15□□□□□ -1.58
RNF43Q68DV7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF43Q68DV7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNF43Q68DV7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RNF43Q68DV7 MUC2-202ENST00000613187 4845 ntBASIC5.15□□□□□ -1.58
RNF43Q68DV7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF43Q68DV7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF43Q68DV7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF43Q68DV7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 Y_RNA.2-201ENST00000362330 96 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 Y_RNA.26-201ENST00000362539 101 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 Y_RNA.214-201ENST00000364201 112 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF43Q68DV7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 RNU6-278P-201ENST00000390945 109 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 DSTNP4-201ENST00000399472 474 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF43Q68DV7 AL024474.1-201ENST00000404655 591 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AL583834.1-201ENST00000406943 343 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 RN7SKP27-201ENST00000410684 333 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 GSTM3P2-201ENST00000412746 530 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 BX682237.1-201ENST00000415016 335 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 COX6CP13-201ENST00000428703 226 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AC099799.1-201ENST00000439809 192 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AL450023.3-201ENST00000440592 271 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AC112498.1-201ENST00000444401 332 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AC116533.1-201ENST00000459748 321 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms