Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AP000526.1-201ENST00000603308 1388 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 RNU6-433P-201ENST00000363216 104 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 Y_RNA.548-201ENST00000384656 105 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 TAS2R15P-201ENST00000390674 928 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 RPS3AP26-201ENST00000398259 784 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 TPMTP3-201ENST00000411928 735 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 RPS7P13-201ENST00000413955 498 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC245291.1-201ENST00000419501 328 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 RPL27AP8-201ENST00000424277 446 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 MTATP6P4-201ENST00000427725 675 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC024082.2-201ENST00000434771 238 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 RN7SL442P-201ENST00000473804 320 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC004263.1-201ENST00000479327 332 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC106872.3-201ENST00000495104 446 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 POU5F1P7-201ENST00000508759 541 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC087276.1-201ENST00000529659 480 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 ELOCP32-201ENST00000548625 324 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AL390240.1-201ENST00000612950 384 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 AL356596.1-201ENST00000624230 379 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 MIR4275-201ENST00000636486 87 ntBASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC30Q5VVM6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 DEFB108F-201ENST00000344638 222 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 Y_RNA.18-201ENST00000362461 102 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 SNORD56.3-201ENST00000363507 71 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 U3.11-201ENST00000364476 212 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 RNU5A-2P-201ENST00000384337 116 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 RNU6-253P-201ENST00000384730 105 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AL591034.1-201ENST00000407447 340 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 YPEL5P1-201ENST00000419731 367 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 NEK4P1-201ENST00000433383 879 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 RSU1P2-202ENST00000437884 485 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 RABEPKP1-201ENST00000440529 1026 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC112653.1-201ENST00000443851 386 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AP000542.1-201ENST00000448473 371 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC011825.1-201ENST00000484967 388 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC068724.1-201ENST00000487100 792 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 HSPE1P23-201ENST00000509838 286 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 MTND5P4-201ENST00000514978 288 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC009812.2-201ENST00000517657 457 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 DEFB108D-201ENST00000527787 222 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AP005205.1-201ENST00000563503 508 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 MIR3921-201ENST00000577308 85 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AP001429.1-201ENST00000602568 530 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AP000811.1-201ENST00000603803 651 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AL158211.4-201ENST00000606988 584 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AP002791.1-201ENST00000623291 381 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 SRP72P2-201ENST00000344851 1979 ntBASIC3.91□□□□□ -1.78
CCDC30Q5VVM6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC30Q5VVM6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC30Q5VVM6 GNG5P1-201ENST00000255500 204 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 RNA5SP383-201ENST00000362934 120 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 RNU6-525P-201ENST00000363685 104 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 RNU6-1078P-201ENST00000364522 103 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 Y_RNA.302-201ENST00000364997 102 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 RNU1-140P-201ENST00000365040 165 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 AL590084.2-201ENST00000401481 382 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 RPS3AP24-201ENST00000407896 734 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 AC096664.2-201ENST00000411843 406 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 RAP1BP1-201ENST00000412709 553 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 MTND1P21-201ENST00000412991 285 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 RPL35AP12-201ENST00000425362 338 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 UBE2V1P13-201ENST00000436983 439 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 LSM1P1-201ENST00000438629 273 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 AL117351.1-201ENST00000438864 766 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 AC108860.1-201ENST00000484521 383 ntBASIC3.9□□□□□ -1.79
CCDC30Q5VVM6 AC092185.1-201ENST00000491371 97 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms