Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RPL21P1-201ENST00000399532 476 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 PGBD4P6-201ENST00000421501 610 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC099336.2-201ENST00000422457 254 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 RPS12P5-201ENST00000423449 371 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 NOTCH2P1-201ENST00000443481 624 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AL356981.1-201ENST00000454879 684 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC099560.2-201ENST00000457554 255 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 RPS18P6-201ENST00000476880 458 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC084198.1-201ENST00000477747 402 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC022447.4-201ENST00000504053 364 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC092436.3-201ENST00000511788 257 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 IGHV3-76-201ENST00000522465 295 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 BNIP3P1-201ENST00000547295 580 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 MIR4489-201ENST00000578869 62 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC007566.2-201ENST00000603642 413 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 Z98751.3-201ENST00000604447 521 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC006329.2-201ENST00000611491 394 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 TUG1_2.1-201ENST00000614234 87 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RNF20Q5VTR2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
RNF20Q5VTR2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 UBBP2-201ENST00000376781 231 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 Y_RNA.477-201ENST00000384352 108 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 MT-TW-201ENST00000387382 68 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 MIR1302-6-201ENST00000408466 90 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 MIR1271-201ENST00000408537 86 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 RNU4-65P-201ENST00000410473 140 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 RPS23P10-201ENST00000416185 486 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC234775.1-201ENST00000454247 670 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 SNORD127-201ENST00000458892 86 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 RPS17P2-201ENST00000461663 408 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 VN1R105P-201ENST00000486595 910 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 FTH1P9-201ENST00000513251 355 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 Y_RNA.715-201ENST00000517082 110 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 IGKV2D-36-201ENST00000518643 226 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC092490.3-201ENST00000545370 572 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC013244.1-201ENST00000604279 193 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC141273.2-201ENST00000618989 130 ntBASIC5.96□□□□□ -1.46
RNF20Q5VTR2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF20Q5VTR2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 RNU1-35P-201ENST00000362782 153 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 Y_RNA.60-201ENST00000362831 98 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 Y_RNA.126-201ENST00000363382 111 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AL078599.1-201ENST00000402075 293 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 RN7SKP106-201ENST00000410832 272 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AC092809.3-201ENST00000415453 231 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AL355433.1-201ENST00000422804 300 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 RPL30P3-201ENST00000424262 333 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AL158071.1-201ENST00000430315 461 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 FTH1P25-201ENST00000447665 469 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 BTF3P6-201ENST00000448054 499 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 RNU7-187P-201ENST00000458985 68 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 RN7SL799P-201ENST00000475891 298 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 RPL21P103-201ENST00000479921 488 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 HMGB3P17-201ENST00000504195 649 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 NDUFB5P1-201ENST00000508134 564 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AC005798.1-201ENST00000513715 387 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 RN7SKP40-201ENST00000517211 242 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 CR383656.7-201ENST00000548164 174 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AC087783.2-201ENST00000605070 562 ntBASIC5.95□□□□□ -1.46
RNF20Q5VTR2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF20Q5VTR2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
RNF20Q5VTR2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF20Q5VTR2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms