Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 LSM1P1-201ENST00000438629 273 ntBASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 SNRPGP13-201ENST00000442212 177 ntBASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 AC245517.4-201ENST00000448601 281 ntBASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 AC104472.2-201ENST00000469035 601 ntBASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 AC022493.1-201ENST00000492984 337 ntBASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 SUB1P1-201ENST00000524415 382 ntBASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 ANP32BP3-201ENST00000559213 706 ntBASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 MTCO3P24-201ENST00000572729 782 ntBASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 PABPC1P7-201ENST00000413177 1513 ntBASIC2.05□□□□□ -2.08
CDC42BPAQ5VT25 Y_RNA.122-201ENST00000363331 96 ntBASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 RNU6-461P-201ENST00000364195 107 ntBASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 HMGB1P10-201ENST00000395823 563 ntBASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 RPS6P14-201ENST00000425165 719 ntBASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 Z85994.2-201ENST00000434327 452 ntBASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 AC009238.1-201ENST00000442165 424 ntBASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 Z96811.1-201ENST00000445880 108 ntBASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 AC009237.6-201ENST00000446969 424 ntBASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 RBM43P1-201ENST00000476891 1081 ntBASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.04□□□□□ -2.08
CDC42BPAQ5VT25 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 RNU1-22P-201ENST00000363334 158 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 SNORD114-22-201ENST00000365423 72 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 HSPE1P1-201ENST00000421494 318 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 AL445669.1-201ENST00000426743 755 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 CALM1P2-201ENST00000452941 448 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 AC135999.1-201ENST00000478962 479 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 AC006390.1-201ENST00000508068 283 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 RNA5SP61-201ENST00000516453 100 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 AC084757.1-201ENST00000559987 490 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 AC068338.1-201ENST00000565567 176 ntBASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.03□□□□□ -2.08
CDC42BPAQ5VT25 U3.40-201ENST00000408706 208 ntBASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 USP9YP6-201ENST00000413550 854 ntBASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 PGBD4P3-201ENST00000440731 581 ntBASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 MOB1AP2-201ENST00000446060 614 ntBASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 USP9YP34-201ENST00000453983 808 ntBASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 HMGN1P7-201ENST00000491722 313 ntBASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.03□□□□□ -2.09
CDC42BPAQ5VT25 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AC093084.1-201ENST00000424233 687 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 RPS6P15-201ENST00000431996 751 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AL121594.1-201ENST00000475906 575 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AC006499.2-201ENST00000513470 337 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AP003033.1-201ENST00000527244 415 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AP005435.4-201ENST00000529514 284 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AL354943.1-201ENST00000572103 781 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 OR4G1P-201ENST00000588632 938 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AC006023.2-201ENST00000609916 167 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AL359740.1-201ENST00000624340 592 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 AL133216.2-202ENST00000634512 349 ntBASIC2.02□□□□□ -2.09
CDC42BPAQ5VT25 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDC42BPAQ5VT25 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.01□□□□□ -2.09
CDC42BPAQ5VT25 OR4R1P-201ENST00000529879 463 ntBASIC2.01□□□□□ -2.09
CDC42BPAQ5VT25 AC006249.1-201ENST00000621223 471 ntBASIC2.01□□□□□ -2.09
CDC42BPAQ5VT25 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2□□□□□ -2.09
CDC42BPAQ5VT25 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2□□□□□ -2.09
CDC42BPAQ5VT25 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CDC42BPAQ5VT25 AC087808.1-201ENST00000520501 361 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2□□□□□ -2.09
CDC42BPAQ5VT25 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2□□□□□ -2.09
CDC42BPAQ5VT25 AC006329.2-201ENST00000611491 394 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
CDC42BPAQ5VT25 CENPCP1-201ENST00000533085 2578 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 RNU6-1080P-201ENST00000383982 107 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 SNORA40.6-201ENST00000391153 128 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 RPL26P37-201ENST00000411983 438 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 UBE2V1P13-201ENST00000436983 439 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 AL121871.1-201ENST00000443413 436 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 AC022431.1-201ENST00000450941 438 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 RN7SKP49-201ENST00000516675 260 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2□□□□□ -2.09
CDC42BPAQ5VT25 MIR6078-201ENST00000611069 100 ntBASIC2□□□□□ -2.09
CDC42BPAQ5VT25 AC114546.3-201ENST00000623582 1734 ntBASIC1.99□□□□□ -2.09
CDC42BPAQ5VT25 RPL21P1-201ENST00000399532 476 ntBASIC1.99□□□□□ -2.09
CDC42BPAQ5VT25 RPL35AP22-201ENST00000436855 335 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms