Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 RPS17P13-201ENST00000448974 407 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 RPS3AP17-201ENST00000472594 777 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC004924.1-201ENST00000480160 781 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC108860.1-201ENST00000484521 383 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC022483.1-201ENST00000514020 567 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 SNORA67.7-201ENST00000516664 135 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 MTCO2P4-201ENST00000517968 247 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 CCNG2P1-201ENST00000549521 1000 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AL359999.1-201ENST00000604513 294 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC106900.2-201ENST00000604994 317 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC245389.1-201ENST00000605141 529 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 HMGB1P50-201ENST00000605814 607 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AL591424.2-201ENST00000617023 128 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC006133.1-201ENST00000617106 264 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 U4.5-201ENST00000617137 123 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 TAB3P1-202ENST00000452645 1634 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 RNY4P34-201ENST00000364779 95 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 RNU6-359P-201ENST00000365466 108 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 RNU6-114P-201ENST00000384704 105 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 MIR670-201ENST00000390142 98 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 RPS3AP24-201ENST00000407896 734 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 SPA17P1-201ENST00000416656 452 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 ISCA1P1-201ENST00000426679 387 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 ARF4P2-201ENST00000430209 526 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 MRPS10P2-201ENST00000431226 381 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AL445584.1-201ENST00000431451 330 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 MTND3P21-201ENST00000433774 331 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 GOT2P5-201ENST00000433995 546 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 RPL17P49-201ENST00000443728 411 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AC007967.1-201ENST00000455422 1159 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AL136097.1-201ENST00000456945 913 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 RPL7P23-201ENST00000493874 747 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AL139099.1-201ENST00000497398 403 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AC010342.1-201ENST00000514047 877 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 YPEL5P3-201ENST00000547227 352 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 ZNF519P2-201ENST00000557032 169 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AC006960.3-201ENST00000561845 705 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 MIR3158-1-201ENST00000583596 81 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 HMGN1P30-201ENST00000589286 268 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AP002826.1-201ENST00000608835 315 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AC072046.2-201ENST00000618366 268 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 AC110994.2-201ENST00000635481 492 ntBASIC4.44□□□□□ -1.7
LONRF3Q496Y0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LONRF3Q496Y0 FARSBP1-201ENST00000435808 1778 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 Y_RNA.46-201ENST00000362695 102 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 U8.3-201ENST00000363321 132 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AL590704.1-201ENST00000402856 794 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 RPL7P25-201ENST00000404151 721 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AL138878.1-201ENST00000405131 347 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 FCF1P10-201ENST00000407590 479 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 RN7SKP53-201ENST00000411337 315 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 RPL7AP73-201ENST00000413490 353 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.43□□□□□ -1.7
LONRF3Q496Y0 AC009961.2-201ENST00000435771 251 ntBASIC4.43□□□□□ -1.7
LONRF3Q496Y0 SNRPEP4-201ENST00000435815 279 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 267.1 ms