Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ZNF680P1-201ENST00000436625 1469 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 BDP1P-201ENST00000582658 1990 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 ZNF962P-201ENST00000443465 3140 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 RNA5SP307-201ENST00000362863 116 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AL359837.1-201ENST00000381357 287 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 MIR454-201ENST00000390180 115 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 RPS20P14-201ENST00000412545 360 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 OR51A5P-201ENST00000415429 942 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 MRPL50P2-201ENST00000416821 482 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AL356095.1-201ENST00000417217 199 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 ZNF90P2-204ENST00000419323 1075 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 BTF3P10-201ENST00000433415 495 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AL512326.1-201ENST00000443050 721 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC020550.1-201ENST00000447385 163 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AL356010.1-201ENST00000456364 102 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AL121769.1-201ENST00000469473 401 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AL132838.2-201ENST00000492041 314 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 ARL2BPP6-201ENST00000512757 439 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC104383.1-201ENST00000530297 370 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 OR5BN1P-201ENST00000532955 829 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC055876.1-202ENST00000567053 138 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC174048.1-201ENST00000603389 144 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AL354984.3-201ENST00000604803 325 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 Z98200.1-201ENST00000607298 470 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 MIR92B-201ENST00000607575 96 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC007998.5-201ENST00000622938 237 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 MIR1321-201ENST00000637766 79 ntBASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC144BQ3MJ40 AC011266.1-201ENST00000624119 3569 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 Y_RNA.367-201ENST00000365544 101 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 NDUFS5P1-201ENST00000405668 289 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 SNORA74C-2-201ENST00000411179 201 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 HMGB3P20-201ENST00000417997 600 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AL117339.2-201ENST00000430475 180 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 RPL23AP25-201ENST00000430973 463 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AC000111.3-201ENST00000433478 193 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 TXNP1-201ENST00000441872 371 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 VN1R105P-201ENST00000486595 910 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 RPL36AP51-201ENST00000487216 318 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 RN7SL812P-201ENST00000493791 279 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 RN7SKP258-201ENST00000517151 304 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AL161729.3-201ENST00000603533 673 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AC007621.1-201ENST00000604544 437 ntBASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC144BQ3MJ40 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
CCDC144BQ3MJ40 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC144BQ3MJ40 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
CCDC144BQ3MJ40 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.9□□□□□ -1.62
CCDC144BQ3MJ40 PRO1804-201ENST00000623780 2050 ntBASIC4.9□□□□□ -1.62
CCDC144BQ3MJ40 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC144BQ3MJ40 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CCDC144BQ3MJ40 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC144BQ3MJ40 RNU6-179P-201ENST00000363350 107 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 Y_RNA.453-201ENST00000384223 109 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 SNORD115-47-201ENST00000391226 86 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 LAP3P1-201ENST00000403648 294 ntBASIC4.9□□□□□ -1.63
CCDC144BQ3MJ40 MIR1277-201ENST00000408536 78 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms