Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MIR551A-201ENST00000385042 96 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 MIR130A-201ENST00000385274 89 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 RNU6-700P-201ENST00000391043 107 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 CYB5AP4-201ENST00000396692 399 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.590-201ENST00000410140 107 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AL030996.1-201ENST00000411430 235 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 SRSF1P1-201ENST00000424058 520 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AL159987.2-201ENST00000432754 307 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 RN7SL346P-201ENST00000491561 294 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 RN7SKP288-201ENST00000516227 268 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC100870.1-201ENST00000522035 505 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC007458.1-201ENST00000542812 373 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AL591516.1-201ENST00000611326 274 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTC1Q2NKJ3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 SNORA11-201ENST00000408789 128 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 TMEM167AP1-201ENST00000423409 219 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 RAB28P5-201ENST00000427490 651 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 RPS23P2-201ENST00000463671 415 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 AC006427.1-201ENST00000514359 712 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 RNU6-971P-201ENST00000516920 106 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 H3F3AP1-201ENST00000559984 334 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 MIR3934-201ENST00000579806 107 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 MIR3976-201ENST00000606807 139 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 AL589994.2-201ENST00000621124 579 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 AC097372.5-201ENST00000623665 376 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 EXOC5P1-201ENST00000510543 1969 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 HSPA8P4-201ENST00000511877 1920 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 AC007785.2-201ENST00000598627 1916 ntBASIC5.86□□□□□ -1.47
CTC1Q2NKJ3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.82-201ENST00000363000 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.92-201ENST00000363043 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 RN7SKP145-201ENST00000363291 303 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.235-201ENST00000364412 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.306-201ENST00000365015 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.308-201ENST00000365043 101 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.312-201ENST00000365089 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.322-201ENST00000365151 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 RNU2-61P-201ENST00000411069 191 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 MTCO1P39-201ENST00000426148 480 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 RPS29P33-201ENST00000456717 146 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.650-201ENST00000459002 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 RPL37P6-202ENST00000464216 403 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 PLGLA-201ENST00000465668 449 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 HMGB1P25-201ENST00000468402 607 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 ATP5LP5-201ENST00000483050 299 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AC083982.1-201ENST00000485679 344 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AC007016.1-201ENST00000512110 244 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AC104057.1-201ENST00000515547 497 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AL671862.1-201ENST00000515851 349 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 SNORD116-25-201ENST00000516517 92 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 Y_RNA.777-201ENST00000516982 102 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AP004607.2-201ENST00000533949 322 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 AC120057.2-201ENST00000571520 271 ntBASIC5.85□□□□□ -1.47
CTC1Q2NKJ3 MIR5701-3-201ENST00000578890 82 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms