Protein–RNA interactions for Protein: Q1ED39

KNOP1, Lysine-rich nucleolar protein 1, humanhuman

Known RBP Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1Q1ED39 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AC022018.1-201ENST00000430685 241 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 RPS29P6-201ENST00000438196 145 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 MTND5P14-201ENST00000441481 1267 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 snoU109.4-201ENST00000458953 143 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AC083906.5-201ENST00000503722 328 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 MTND1P22-201ENST00000510572 951 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AC010625.1-201ENST00000511296 403 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 MTCYBP43-201ENST00000513621 740 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AC119751.5-201ENST00000514077 770 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 MTCO2P32-201ENST00000514865 403 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 MIR4325-201ENST00000583049 90 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 RNU6-88P-201ENST00000606801 100 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AL020991.1-201ENST00000612314 373 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 ATP5A1P2-202ENST00000616464 443 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AC010338.1-201ENST00000621823 717 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AC079248.2-201ENST00000623779 326 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 AC007671.2-201ENST00000637344 619 ntBASIC3.17□□□□□ -1.9
KNOP1Q1ED39 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KNOP1Q1ED39 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 RPL21P132-201ENST00000331267 462 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 RNA5SP258-201ENST00000362750 119 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 RNU6-433P-201ENST00000363216 104 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 RNU6-343P-201ENST00000364709 104 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 SNORA70.4-201ENST00000365509 134 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 DEFB109C-201ENST00000382575 264 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 DEFB109B-201ENST00000382656 264 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 RNU6-253P-201ENST00000384730 105 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 RAD23BP2-201ENST00000416003 1207 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AC083875.1-201ENST00000419509 405 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AL365203.2-201ENST00000423444 196 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 RPL35AP12-201ENST00000425362 338 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AC234781.2-201ENST00000426370 994 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 BX322784.1-201ENST00000455793 1077 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 RPS27AP1-201ENST00000475545 471 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 SCGB1D5P-201ENST00000515134 247 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 COX6CP8-201ENST00000522620 226 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 OR4P1P-201ENST00000530808 1136 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AC090616.2-202ENST00000584248 222 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AL390208.1-201ENST00000605885 644 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AC004223.4-201ENST00000612426 332 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AL162274.2-201ENST00000614406 332 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AL603755.1-201ENST00000619504 163 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AL031667.3-201ENST00000620124 655 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AC004925.1-201ENST00000624256 2706 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 AL079305.1-201ENST00000623159 3008 ntBASIC3.16□□□□□ -1.9
KNOP1Q1ED39 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KNOP1Q1ED39 MAPK10-362ENST00000641864 4484 ntBASIC3.15□□□□□ -1.9
KNOP1Q1ED39 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 Y_RNA.18-201ENST00000362461 102 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 RNA5SP88-201ENST00000365560 109 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 RNY3P9-201ENST00000384727 106 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 MIR512-1-201ENST00000384913 84 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 MTND2P18-201ENST00000419962 1030 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 MTND1P20-201ENST00000430341 950 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 HMGN2P20-201ENST00000437531 273 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 SNRPEP7-201ENST00000438350 220 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 AC009969.1-201ENST00000438726 172 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 OR6K5P-201ENST00000447050 945 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 HMGB1P15-201ENST00000453854 435 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.15□□□□□ -1.91
KNOP1Q1ED39 ARPC3P2-201ENST00000457786 533 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 RNU7-125P-201ENST00000458760 62 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 S100A11P2-201ENST00000467589 312 ntBASIC3.15□□□□□ -1.91
KNOP1Q1ED39 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms