Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AC116533.1-201ENST00000459748 321 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 AL049874.1-201ENST00000489560 388 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 MTCO3P9-201ENST00000506989 781 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 CCDC34P1-201ENST00000507441 517 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.56□□□□□ -1.84
CFHR3Q02985 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.56□□□□□ -1.84
CFHR3Q02985 MIR4719-201ENST00000585233 84 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.56□□□□□ -1.84
CFHR3Q02985 BDH2P1-201ENST00000602288 736 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 AC174048.1-201ENST00000603389 144 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 AC087045.1-201ENST00000605856 382 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.56□□□□□ -1.84
CFHR3Q02985 MIR7641-1-201ENST00000627518 61 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CFHR3Q02985 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CFHR3Q02985 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CFHR3Q02985 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.56□□□□□ -1.84
CFHR3Q02985 RAD17P1-201ENST00000418130 2042 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 AC103710.2-202ENST00000641454 2853 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 MAPK10-349ENST00000641767 3661 ntBASIC3.56□□□□□ -1.84
CFHR3Q02985 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.55□□□□□ -1.84
CFHR3Q02985 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CFHR3Q02985 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 RNA5SP443-201ENST00000363083 132 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 RNU6-522P-201ENST00000364497 107 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 Y_RNA.509-201ENST00000384506 99 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 MIR1271-201ENST00000408537 86 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 RN7SKP216-201ENST00000411050 312 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.55□□□□□ -1.84
CFHR3Q02985 AC007390.1-201ENST00000415722 356 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 EI24P1-201ENST00000416584 867 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 ARL5AP1-201ENST00000418991 388 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 AL732292.1-201ENST00000426692 226 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 RPL21P112-201ENST00000434403 463 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.55□□□□□ -1.84
CFHR3Q02985 RPS26P2-201ENST00000440331 348 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 RPL23AP93-201ENST00000440847 484 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 SCARNA18-201ENST00000459004 134 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 snoU13.1-201ENST00000459157 104 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AC004801.2-202ENST00000463559 283 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AC006463.2-201ENST00000473326 348 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AC083904.1-201ENST00000487828 231 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.55□□□□□ -1.84
CFHR3Q02985 AC103851.1-201ENST00000506833 274 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 RNU6-677P-201ENST00000516914 101 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 RN7SKP256-201ENST00000517201 314 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.55□□□□□ -1.84
CFHR3Q02985 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.55□□□□□ -1.84
CFHR3Q02985 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 SCOCP1-201ENST00000554676 349 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.55□□□□□ -1.84
CFHR3Q02985 AC005668.1-201ENST00000571142 476 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.55□□□□□ -1.84
CFHR3Q02985 MIR4795-201ENST00000584182 89 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.55□□□□□ -1.84
CFHR3Q02985 RNF138P2-201ENST00000603490 592 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AL138889.2-201ENST00000603883 242 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AC092807.2-201ENST00000609367 243 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 AL360181.4-201ENST00000621752 134 ntBASIC3.55□□□□□ -1.84
CFHR3Q02985 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.55□□□□□ -1.84
CFHR3Q02985 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.55□□□□□ -1.84
CFHR3Q02985 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CFHR3Q02985 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CFHR3Q02985 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CFHR3Q02985 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CFHR3Q02985 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CFHR3Q02985 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.54□□□□□ -1.84
CFHR3Q02985 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.54□□□□□ -1.84
CFHR3Q02985 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
CFHR3Q02985 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CFHR3Q02985 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CFHR3Q02985 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.54□□□□□ -1.84
CFHR3Q02985 LINC01109-201ENST00000603837 3081 ntBASIC3.54□□□□□ -1.84
CFHR3Q02985 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CFHR3Q02985 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CFHR3Q02985 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CFHR3Q02985 Y_RNA.100-201ENST00000363141 102 ntBASIC3.54□□□□□ -1.84
CFHR3Q02985 RNU6-831P-201ENST00000384548 107 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms