Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
HIST1H1AQ02539 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 U3.12-201ENST00000364498 214 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 SNORA36C-201ENST00000384289 132 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 HIGD1AP2-201ENST00000446367 280 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AL589880.1-201ENST00000448271 287 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AP001486.1-201ENST00000463339 476 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 CABYRP1-201ENST00000465493 1045 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 RN7SKP31-201ENST00000516354 278 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AL450336.1-201ENST00000605180 586 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AC107294.1-201ENST00000609524 467 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AL354685.2-201ENST00000448218 1447 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AC008432.1-201ENST00000615912 1320 ntBASIC1.65□□□□□ -2.15
HIST1H1AQ02539 AC131280.1-202ENST00000624067 4211 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 RNU6-525P-201ENST00000363685 104 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC009963.1-201ENST00000417265 157 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC005005.2-201ENST00000420779 380 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 FO393419.3-201ENST00000428741 282 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC092573.2-201ENST00000434546 243 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 SDR42E1P3-201ENST00000438345 502 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AL021397.1-201ENST00000451806 248 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 RNU6-420P-201ENST00000458780 107 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 PCNAP1-201ENST00000505363 709 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 RNA5SP200-201ENST00000516360 103 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 RNU2-44P-201ENST00000516795 194 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC022616.2-201ENST00000523185 300 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC009097.3-201ENST00000563557 1018 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC025165.5-201ENST00000602802 578 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AL355877.2-201ENST00000603670 358 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC012493.3-201ENST00000604494 112 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC079791.1-201ENST00000605356 973 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC055876.5-201ENST00000605667 259 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC120053.1-201ENST00000607706 736 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC092954.1-201ENST00000609121 445 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AL627230.6-201ENST00000611129 280 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC093591.3-201ENST00000634516 308 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AC009950.2-201ENST00000636548 183 ntBASIC1.64□□□□□ -2.15
HIST1H1AQ02539 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
HIST1H1AQ02539 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 RNA5SP289-201ENST00000362332 137 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 RNU4-23P-201ENST00000362839 140 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AL023807.1-201ENST00000407932 359 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 ZNF90P2-204ENST00000419323 1075 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AL139413.1-201ENST00000421309 217 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC018634.1-201ENST00000437554 401 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 RPL23AP7-203ENST00000449021 469 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 EEF1B2P7-201ENST00000451177 676 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 HMGN1P8-201ENST00000463578 288 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AL049873.1-201ENST00000480540 376 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 RN7SL274P-201ENST00000492268 272 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 SCARNA11.3-201ENST00000517276 130 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC135628.1-201ENST00000568867 534 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC078899.2-201ENST00000595282 212 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 AC012669.1-201ENST00000603209 283 ntBASIC1.63□□□□□ -2.15
HIST1H1AQ02539 MIR6873-201ENST00000622788 63 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms