Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 COX6CP14-201ENST00000469580 174 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 AC008885.2-201ENST00000509506 930 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.1□□□□□ -2.23
PRKDCP78527 SNORD116-26-201ENST00000516006 96 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
PRKDCP78527 AC084851.1-201ENST00000529105 249 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
PRKDCP78527 RBBP8P1-201ENST00000449447 1844 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.1□□□□□ -2.23
PRKDCP78527 HMGN1P8-201ENST00000463578 288 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC1.1□□□□□ -2.23
PRKDCP78527 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.1□□□□□ -2.23
PRKDCP78527 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.1□□□□□ -2.23
PRKDCP78527 SNORA50A-202ENST00000629536 136 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.1□□□□□ -2.23
PRKDCP78527 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PRKDCP78527 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
PRKDCP78527 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 AC240504.1-201ENST00000395709 845 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.1□□□□□ -2.23
PRKDCP78527 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.1□□□□□ -2.23
PRKDCP78527 FABP5P3-201ENST00000437960 408 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 RFC5P1-201ENST00000454419 874 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 TBCAP3-201ENST00000512475 312 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 SETP7-201ENST00000552169 453 ntBASIC1.1□□□□□ -2.23
PRKDCP78527 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PRKDCP78527 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PRKDCP78527 AC090774.1-201ENST00000435925 246 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 PTGES3P5-201ENST00000455109 434 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 AC069528.1-202ENST00000482888 637 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 AC021146.7-201ENST00000509604 775 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.09□□□□□ -2.23
PRKDCP78527 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.09□□□□□ -2.23
PRKDCP78527 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.09□□□□□ -2.23
PRKDCP78527 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
PRKDCP78527 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
PRKDCP78527 MTCO1P6-201ENST00000481192 1384 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 MTND2P2-201ENST00000434633 945 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 GTF2IP7-202ENST00000436677 309 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 RPL7P5-201ENST00000471472 736 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
PRKDCP78527 AP004242.1-201ENST00000533701 349 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 AC105245.1-201ENST00000581934 244 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.09□□□□□ -2.23
PRKDCP78527 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
PRKDCP78527 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.09□□□□□ -2.23
PRKDCP78527 MTND2P16-201ENST00000419987 799 ntBASIC1.09□□□□□ -2.24
PRKDCP78527 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.09□□□□□ -2.24
PRKDCP78527 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.09□□□□□ -2.24
PRKDCP78527 RPS3AP44-201ENST00000425466 790 ntBASIC1.09□□□□□ -2.24
PRKDCP78527 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.09□□□□□ -2.24
PRKDCP78527 HMGB1P45-201ENST00000435986 653 ntBASIC1.09□□□□□ -2.24
PRKDCP78527 snoU13.3-201ENST00000459441 104 ntBASIC1.09□□□□□ -2.24
PRKDCP78527 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.09□□□□□ -2.24
PRKDCP78527 AC103810.8-201ENST00000607347 118 ntBASIC1.09□□□□□ -2.24
PRKDCP78527 AC090970.3-201ENST00000612566 866 ntBASIC1.09□□□□□ -2.24
PRKDCP78527 AL121594.5-201ENST00000631724 573 ntBASIC1.09□□□□□ -2.24
PRKDCP78527 MKKS-204ENST00000639674 192 ntBASIC1.09□□□□□ -2.24
PRKDCP78527 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
PRKDCP78527 SNORA67.6-201ENST00000391093 99 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 RAD23BP2-201ENST00000416003 1207 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.08□□□□□ -2.24
PRKDCP78527 RPS15AP1-201ENST00000457423 391 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 SNORA31.15-201ENST00000516771 132 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.08□□□□□ -2.24
PRKDCP78527 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.08□□□□□ -2.24
PRKDCP78527 MIR4419B-201ENST00000577260 68 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 RPL23AP78-201ENST00000599928 470 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AC013444.2-201ENST00000603317 787 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AC083899.3-201ENST00000603413 594 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AC048347.1-201ENST00000624621 427 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AC011155.1-201ENST00000316512 456 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
PRKDCP78527 U3.15-201ENST00000365398 212 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 HMGN2P38-201ENST00000423806 265 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 SEC63P1-201ENST00000425785 1258 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 RPS6P15-201ENST00000431996 751 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.08□□□□□ -2.24
PRKDCP78527 TPRKBP1-201ENST00000456243 481 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.08□□□□□ -2.24
PRKDCP78527 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
PRKDCP78527 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.08□□□□□ -2.24
PRKDCP78527 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.08□□□□□ -2.24
PRKDCP78527 AC009318.3-201ENST00000616916 503 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AC008121.3-201ENST00000618726 433 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
PRKDCP78527 Y_RNA.115-201ENST00000363272 98 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 TRGV6-201ENST00000417928 299 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AL645568.3-201ENST00000433683 316 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AC087190.1-201ENST00000484462 480 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AC079203.1-201ENST00000487972 404 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 RNA5SP337-201ENST00000517007 109 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.08□□□□□ -2.24
PRKDCP78527 AC012493.3-201ENST00000604494 112 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 AC097504.2-201ENST00000608088 454 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
PRKDCP78527 RNU1-133P-201ENST00000364867 167 ntBASIC1.08□□□□□ -2.24
PRKDCP78527 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms