Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC016727.1-205ENST00000605437 569 ntBASIC1.68□□□□□ -2.14
UBA52P62987 AP004247.3-201ENST00000608682 624 ntBASIC1.68□□□□□ -2.14
UBA52P62987 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
UBA52P62987 AL356266.1-201ENST00000623311 483 ntBASIC1.68□□□□□ -2.14
UBA52P62987 AC095031.1-201ENST00000623685 672 ntBASIC1.68□□□□□ -2.14
UBA52P62987 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.68□□□□□ -2.14
UBA52P62987 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
UBA52P62987 ZNF355P-201ENST00000427301 3216 ntBASIC1.68□□□□□ -2.14
UBA52P62987 SNORA3A-201ENST00000364113 130 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AL356320.2-201ENST00000417263 507 ntBASIC1.67□□□□□ -2.14
UBA52P62987 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.67□□□□□ -2.14
UBA52P62987 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.67□□□□□ -2.14
UBA52P62987 MTCYBP45-201ENST00000435243 565 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.67□□□□□ -2.14
UBA52P62987 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.67□□□□□ -2.14
UBA52P62987 MTCYBP34-201ENST00000439552 670 ntBASIC1.67□□□□□ -2.14
UBA52P62987 RNF2P1-201ENST00000442955 1010 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.67□□□□□ -2.14
UBA52P62987 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.67□□□□□ -2.14
UBA52P62987 PSPHP1-201ENST00000450062 261 ntBASIC1.67□□□□□ -2.14
UBA52P62987 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.67□□□□□ -2.14
UBA52P62987 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.67□□□□□ -2.14
UBA52P62987 RPL23AP41-201ENST00000484754 458 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AC108120.2-201ENST00000512973 294 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AC006499.2-201ENST00000513470 337 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.67□□□□□ -2.14
UBA52P62987 CYCSP26-201ENST00000534107 320 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AC068339.2-201ENST00000534395 618 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.67□□□□□ -2.14
UBA52P62987 HSPE1P3-201ENST00000559254 309 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.67□□□□□ -2.14
UBA52P62987 AP000942.3-201ENST00000603702 160 ntBASIC1.67□□□□□ -2.14
UBA52P62987 AP004372.1-201ENST00000604842 844 ntBASIC1.67□□□□□ -2.14
UBA52P62987 MIR6845-201ENST00000613182 61 ntBASIC1.67□□□□□ -2.14
UBA52P62987 HSPA8P4-201ENST00000511877 1920 ntBASIC1.67□□□□□ -2.14
UBA52P62987 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.67□□□□□ -2.14
UBA52P62987 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBA52P62987 AC008669.1-201ENST00000565823 2178 ntBASIC1.66□□□□□ -2.14
UBA52P62987 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBA52P62987 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
UBA52P62987 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.66□□□□□ -2.14
UBA52P62987 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBA52P62987 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
UBA52P62987 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBA52P62987 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBA52P62987 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBA52P62987 AL161781.1-201ENST00000354277 403 ntBASIC1.66□□□□□ -2.14
UBA52P62987 SNORA16B-201ENST00000364674 135 ntBASIC1.66□□□□□ -2.14
UBA52P62987 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.66□□□□□ -2.14
UBA52P62987 MTCYBP29-201ENST00000436327 1006 ntBASIC1.66□□□□□ -2.14
UBA52P62987 UBE2V1P13-201ENST00000436983 439 ntBASIC1.66□□□□□ -2.14
UBA52P62987 RNA5SP233-201ENST00000459153 113 ntBASIC1.66□□□□□ -2.14
UBA52P62987 AC091917.2-201ENST00000505002 744 ntBASIC1.66□□□□□ -2.14
UBA52P62987 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.66□□□□□ -2.14
UBA52P62987 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
UBA52P62987 AC010546.1-201ENST00000569391 485 ntBASIC1.66□□□□□ -2.14
UBA52P62987 MIR3117-201ENST00000584034 78 ntBASIC1.66□□□□□ -2.14
UBA52P62987 SNORD14A-201ENST00000606526 91 ntBASIC1.66□□□□□ -2.14
UBA52P62987 AL391813.2-201ENST00000609113 322 ntBASIC1.66□□□□□ -2.14
UBA52P62987 AC093673.2-201ENST00000609674 331 ntBASIC1.66□□□□□ -2.14
UBA52P62987 MFSD8-245ENST00000641743 948 ntBASIC1.66□□□□□ -2.14
UBA52P62987 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBA52P62987 Y_RNA.238-201ENST00000364441 102 ntBASIC1.65□□□□□ -2.15
UBA52P62987 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBA52P62987 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.65□□□□□ -2.15
UBA52P62987 RNU2-2P-201ENST00000410396 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 RNU6-193P-201ENST00000410977 107 ntBASIC1.65□□□□□ -2.15
UBA52P62987 RNA5SP498-201ENST00000411342 120 ntBASIC1.65□□□□□ -2.15
UBA52P62987 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.65□□□□□ -2.15
UBA52P62987 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.65□□□□□ -2.15
UBA52P62987 NDUFB4P2-201ENST00000509515 391 ntBASIC1.65□□□□□ -2.15
UBA52P62987 RN7SKP31-201ENST00000516354 278 ntBASIC1.65□□□□□ -2.15
UBA52P62987 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.65□□□□□ -2.15
UBA52P62987 AC087272.1-201ENST00000523624 533 ntBASIC1.65□□□□□ -2.15
UBA52P62987 TRAV11-201ENST00000539512 339 ntBASIC1.65□□□□□ -2.15
UBA52P62987 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.15-201ENST00000611544 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.16-201ENST00000613119 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.12-201ENST00000613778 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.20-201ENST00000613956 192 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.9-201ENST00000615427 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.11-201ENST00000616345 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.2-201ENST00000616535 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.3-201ENST00000617785 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.19-201ENST00000618602 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 RNU2-1-201ENST00000618664 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.6-201ENST00000619225 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.5-201ENST00000619465 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 U2.10-201ENST00000620268 191 ntBASIC1.65□□□□□ -2.15
UBA52P62987 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.65□□□□□ -2.15
UBA52P62987 AC091932.3-201ENST00000624223 323 ntBASIC1.65□□□□□ -2.15
UBA52P62987 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
UBA52P62987 MTND5P28-201ENST00000438005 1594 ntBASIC1.64□□□□□ -2.15
UBA52P62987 AL359893.1-201ENST00000447628 1580 ntBASIC1.64□□□□□ -2.15
UBA52P62987 RNU1-17P-201ENST00000363022 152 ntBASIC1.64□□□□□ -2.15
UBA52P62987 RNA5SP247-201ENST00000411181 105 ntBASIC1.64□□□□□ -2.15
UBA52P62987 ARL2BPP3-201ENST00000421226 480 ntBASIC1.64□□□□□ -2.15
UBA52P62987 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.64□□□□□ -2.15
UBA52P62987 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBA52P62987 TPT1P14-201ENST00000448018 505 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms