Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RPS28P62857 AC004808.2-201ENST00000627965 773 ntBASIC1.31□□□□□ -2.2
RPS28P62857 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPS28P62857 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPS28P62857 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPS28P62857 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
RPS28P62857 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
RPS28P62857 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.3□□□□□ -2.2
RPS28P62857 SNORA8-201ENST00000384574 139 ntBASIC1.3□□□□□ -2.2
RPS28P62857 RNU4-6P-201ENST00000410804 122 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AL158825.1-201ENST00000414735 521 ntBASIC1.3□□□□□ -2.2
RPS28P62857 RPS24P7-201ENST00000416921 246 ntBASIC1.3□□□□□ -2.2
RPS28P62857 CCDC58P2-201ENST00000417131 366 ntBASIC1.3□□□□□ -2.2
RPS28P62857 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.3□□□□□ -2.2
RPS28P62857 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
RPS28P62857 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC1.3□□□□□ -2.2
RPS28P62857 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.3□□□□□ -2.2
RPS28P62857 RPS29P17-201ENST00000430795 166 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC1.3□□□□□ -2.2
RPS28P62857 AC112220.1-201ENST00000434628 355 ntBASIC1.3□□□□□ -2.2
RPS28P62857 MTCYBP45-201ENST00000435243 565 ntBASIC1.3□□□□□ -2.2
RPS28P62857 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.3□□□□□ -2.2
RPS28P62857 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.3□□□□□ -2.2
RPS28P62857 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.3□□□□□ -2.2
RPS28P62857 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RPS28P62857 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
RPS28P62857 RPL12P20-201ENST00000475538 479 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AC034222.1-201ENST00000494052 532 ntBASIC1.3□□□□□ -2.2
RPS28P62857 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.3□□□□□ -2.2
RPS28P62857 RNA5SP112-201ENST00000515937 99 ntBASIC1.3□□□□□ -2.2
RPS28P62857 RNA5SP96-201ENST00000516041 107 ntBASIC1.3□□□□□ -2.2
RPS28P62857 IGKV2-26-201ENST00000518305 343 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.3□□□□□ -2.2
RPS28P62857 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC1.3□□□□□ -2.2
RPS28P62857 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.3□□□□□ -2.2
RPS28P62857 AC007448.1-201ENST00000582714 234 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AC010928.2-201ENST00000588017 287 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AC022916.3-201ENST00000592961 742 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.3□□□□□ -2.2
RPS28P62857 AL020997.3-201ENST00000602843 359 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC1.3□□□□□ -2.2
RPS28P62857 AC067747.1-201ENST00000608026 250 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AC004067.1-201ENST00000608733 700 ntBASIC1.3□□□□□ -2.2
RPS28P62857 MIR6774-201ENST00000614651 70 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AC073569.3-201ENST00000619055 682 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AC005899.6-201ENST00000620729 297 ntBASIC1.3□□□□□ -2.2
RPS28P62857 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
RPS28P62857 AC091953.2-201ENST00000623979 160 ntBASIC1.3□□□□□ -2.2
RPS28P62857 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC1.3□□□□□ -2.2
RPS28P62857 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.3□□□□□ -2.2
RPS28P62857 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.29□□□□□ -2.2
RPS28P62857 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RPS28P62857 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RPS28P62857 RN7SKP171-201ENST00000364417 303 ntBASIC1.29□□□□□ -2.2
RPS28P62857 SNORA70F-201ENST00000384142 135 ntBASIC1.29□□□□□ -2.2
RPS28P62857 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RPS28P62857 MIR934-201ENST00000401241 83 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.29□□□□□ -2.2
RPS28P62857 OR51A3P-201ENST00000413596 924 ntBASIC1.29□□□□□ -2.2
RPS28P62857 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.29□□□□□ -2.2
RPS28P62857 PSMA6P3-201ENST00000428242 164 ntBASIC1.29□□□□□ -2.2
RPS28P62857 RPL31P54-201ENST00000429803 370 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC1.29□□□□□ -2.2
RPS28P62857 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.29□□□□□ -2.2
RPS28P62857 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RPS28P62857 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.29□□□□□ -2.2
RPS28P62857 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RPS28P62857 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC1.29□□□□□ -2.2
RPS28P62857 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.29□□□□□ -2.2
RPS28P62857 PPP1R2P5-201ENST00000457256 603 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AP001992.1-205ENST00000462248 379 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AC106707.2-201ENST00000484182 374 ntBASIC1.29□□□□□ -2.2
RPS28P62857 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
RPS28P62857 RN7SKP24-201ENST00000515888 284 ntBASIC1.29□□□□□ -2.2
RPS28P62857 SNORA4.4-201ENST00000515921 135 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.29□□□□□ -2.2
RPS28P62857 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.29□□□□□ -2.2
RPS28P62857 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.29□□□□□ -2.2
RPS28P62857 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.29□□□□□ -2.2
RPS28P62857 NCAPGP2-201ENST00000557911 754 ntBASIC1.29□□□□□ -2.2
RPS28P62857 SULT1C2P1-202ENST00000562418 459 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AC106782.4-201ENST00000568264 210 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.29□□□□□ -2.2
RPS28P62857 AL354943.1-201ENST00000572103 781 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AC024614.2-201ENST00000577584 372 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AC138207.8-204ENST00000579588 527 ntBASIC1.29□□□□□ -2.2
RPS28P62857 MIR4737-201ENST00000583979 81 ntBASIC1.29□□□□□ -2.2
RPS28P62857 MIR5002-201ENST00000584713 97 ntBASIC1.29□□□□□ -2.2
RPS28P62857 AC009314.1-201ENST00000603871 304 ntBASIC1.29□□□□□ -2.2
RPS28P62857 BX322635.1-201ENST00000605804 496 ntBASIC1.29□□□□□ -2.2
RPS28P62857 FTX_3.1-201ENST00000610451 147 ntBASIC1.29□□□□□ -2.2
RPS28P62857 NAA60-237ENST00000615865 326 ntTSL 5 BASIC1.29□□□□□ -2.2
RPS28P62857 MIR6071-201ENST00000616741 78 ntBASIC1.29□□□□□ -2.2
RPS28P62857 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.29□□□□□ -2.2
RPS28P62857 AC008432.1-201ENST00000615912 1320 ntBASIC1.29□□□□□ -2.2
RPS28P62857 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.29□□□□□ -2.2
RPS28P62857 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RPS28P62857 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RPS28P62857 RNA5SP160-201ENST00000364866 120 ntBASIC1.28□□□□□ -2.2
RPS28P62857 XGY1-201ENST00000381172 446 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms